| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1178 |
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| Symbol | |
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| ID | 3683316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 1448109 |
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| End bp | 1448951 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637716515 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_321697 |
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| Protein GI | 75907401 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGGT GGTTATTGGA GCAAGGGCGG GTGAAGTTAA AAAGAGTATT AACTATAGGT
GTGCTTACCG CACTGAGCGC AATTACCAGC GTTTCCTGTA GTAATAATAA AGAAGTGTTG
GTAACAGAAA TAGGAGTAAA TCCTCCTAGC CGTCGGACAA CCAACAATTC TCAAGCTGGG
CAATTTTACG TTCAAGGGCA AAGACAGCAC GCTCAAGGTG ATTCACAAGG GGCGATCGCT
TCCTATGATA AAGCAATTGG CTTAGATCCT GACTATGGCG CTGCCTATAG GGGACGAGGA
TTAGCTTACT TTGATTTGGG AGACAAACAA AAAGCGATCG CCGACTACAA CGAAGCCATT
CGCCTTTCCC CCAACGATGC CGAAGCCTTT AACAGTCGGG GAAACGCCCG CGCCTCTCTA
GGTGATAACG CCGGAGCGAT TACCGACTAC AACGAAGCCA TTCGCCTTTC ACCCAACTAC
GCCGAAGCCT ATAATAACCG GGGCAATGCT CGTTCTGTCC AAGGGGACAA AAGCGGCTCT
ATAGAAGACT TTAACCAAGC AATTCGCCTC AACCCCAAAT ATGCGATCGC CTACAACAAC
CGAGGTAATG CCCGTGCATC CCAGGGGGAC AGCCAAGGAG CCATATCCGA CTACAATCAA
GCCATTCGCC TTAACTCTAA CTTTGGCCCT GCCTATAATA ATCGAGGTAA TGCCCGTGCA
GCCCAAGGTG ACAAACAAGG AGCGCTGGAA GACTTACAAA AAGCAGCAGA TATCTTCCAG
CGCCAAAACA ATAACGACTT ATACCAGCAA GCGATGAATA ATATCAAAGA GTTGGGACAG
TAG
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| Protein sequence | MKRWLLEQGR VKLKRVLTIG VLTALSAITS VSCSNNKEVL VTEIGVNPPS RRTTNNSQAG
QFYVQGQRQH AQGDSQGAIA SYDKAIGLDP DYGAAYRGRG LAYFDLGDKQ KAIADYNEAI
RLSPNDAEAF NSRGNARASL GDNAGAITDY NEAIRLSPNY AEAYNNRGNA RSVQGDKSGS
IEDFNQAIRL NPKYAIAYNN RGNARASQGD SQGAISDYNQ AIRLNSNFGP AYNNRGNARA
AQGDKQGALE DLQKAADIFQ RQNNNDLYQQ AMNNIKELGQ
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