| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1177 |
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| Symbol | |
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| ID | 3683315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1446361 |
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| End bp | 1448040 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637716514 |
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| Product | Na+/solute symporter |
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| Protein accession | YP_321696 |
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| Protein GI | 75907400 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAGTTG AAATTTGGAC GATTCTCATA GTTGGACTCT CGTTTGTTGC CTACATTTAT
ATTGGTTGGC AATCACGAGT CAAGAGTAGT AAAGACTTTT ATGTGGCAGG TCAAGGTATT
CCTTCCATTG CGAATGGTGC AGCCACCGCC GCCGACTGGA TGTCTGCCGC GTCGTTTATC
TCAATGGCGG GACTGATTTC TTTTTTGGGT TATGACGGTT CTATTTACCT CATGGGTTGG
ACTGGTGGCT ACGTGCTGCT GGCATTATTA TTAGCTCCAT ATCTGCGTAA ATTTGGTAAG
TATACTGTGC CGGATTTTGT AGGCGATCGC TACTATTCTA ATGTGGCGCG TCTAGTAGCA
GTGGTAGCCG CAATTTTCGT CTCTCTCACC TACGTTGCTG GGCAAATGCG CGGTGTGGGT
ATTGTTTTCA GCCGCTTTTT GCAAGTTGAC ATCAACACGG GTGTCATCAT CGGGATGGTG
ATTGTCGGCT TTTTTGCGGT GTTGGGGGGA ATGAAAGGTA TCACCTGGAC GCAAGTAGCC
CAATATGGAG TTTTGATTGT AGCTTACTTG ATTCCAGCGA TCGCGATCGC CTGGAAACTC
ACAGGCAATC CCATTCCTCA GTTAGCATTT ACCTTTAGTG ATGTTGCTAC GAAGCTGAAT
CAAATCCAAG TAGATTTAGG CTTTCAAGAA TATACCCAGC CTTTTGTCAA TAAGACAATG
CTGGATGTAT TATTCACCAC AATCGCCTTA ATGGTAGGTA CTGCTGGCTT ACCTCATATC
ATCGTCAGAT TTTACACAGT TCCCAGTGTC CGCGCTGCCA GATTTTCAGC AGGTTGGGCG
CTGTTATTTA TCGCCATTCT CTACACCACA GCGCCGGCGC TTTCCATGTT TGCCCGTTAC
AACCTAATTA CTACCCTGCA CAATCAAACG ATTACAGAAG TACAACAGCT AGACTGGGCG
AATAAATGGG AAAAAACTGG ACTGCTGAAG TTTGAAGATA AAAATAATGA TGGCCGTCTC
CAGTTAACCC CCAAAAAAGA CACCAATGAA ATTACAATTG ACCGAGATAT TATCGTGCTG
TCTACACCAG AGGTCGCAAA ACTAGCACCT TGGGTAATTG CTTTGGTTGC GGCTGGTGGT
TTGGCGGCTG CTTTATCTAC AGCATCAGGG TTGTTACTCG TAATTTCCAG TTCCGTAGCC
CACGATATTT ATTACCGTAT CCTCGATTCC AGCGCTTCGG AAAAAAAACG AGTGTTTGTT
GGGCGCGTCA TGGTGGGTTT GTCTGTTGTT CTCGCTGGCT ACTTTGGTGT CAATCCACCG
GGGTTTGTGA GTGAAGTAGT AGCTTTTGCC TTTGGTTTAG CGGCTGCAAG CTTCTTCCCA
GTTATTGTAC TGGGAATTTT CGATAAGCGT ACCAATTCCG AAGGTGCGAT CGCCGGGATG
TTGTCAGGGT TAATTTTTAC GATTATTTAC ATCATCGGCG TGAAGTTTGC AGGTATGCAG
CCTTGGTTTT TTGGTGTATC CCCTGAAGGA ATTGGCACTT TGGGTATGCT GATTAACCTA
GTAGTGACAC TAGTAGTTTC ACGCCTTACC CCACCGCCAC CAGCAGAAAT TCAGGCGATG
GTAGAAGATT TACGTTCACC ATCTATCGAA GAAGAAGAAG TGCAACCAAT TGGGCATTAG
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| Protein sequence | MSVEIWTILI VGLSFVAYIY IGWQSRVKSS KDFYVAGQGI PSIANGAATA ADWMSAASFI
SMAGLISFLG YDGSIYLMGW TGGYVLLALL LAPYLRKFGK YTVPDFVGDR YYSNVARLVA
VVAAIFVSLT YVAGQMRGVG IVFSRFLQVD INTGVIIGMV IVGFFAVLGG MKGITWTQVA
QYGVLIVAYL IPAIAIAWKL TGNPIPQLAF TFSDVATKLN QIQVDLGFQE YTQPFVNKTM
LDVLFTTIAL MVGTAGLPHI IVRFYTVPSV RAARFSAGWA LLFIAILYTT APALSMFARY
NLITTLHNQT ITEVQQLDWA NKWEKTGLLK FEDKNNDGRL QLTPKKDTNE ITIDRDIIVL
STPEVAKLAP WVIALVAAGG LAAALSTASG LLLVISSSVA HDIYYRILDS SASEKKRVFV
GRVMVGLSVV LAGYFGVNPP GFVSEVVAFA FGLAAASFFP VIVLGIFDKR TNSEGAIAGM
LSGLIFTIIY IIGVKFAGMQ PWFFGVSPEG IGTLGMLINL VVTLVVSRLT PPPPAEIQAM
VEDLRSPSIE EEEVQPIGH
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