Gene Ava_1171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1171 
Symbol 
ID3683367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1438715 
End bp1439893 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content47% 
IMG OID637716508 
Productphosphoserine aminotransferase 
Protein accessionYP_321690 
Protein GI75907394 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG1932] Phosphoserine aminotransferase 
TIGRFAM ID[TIGR01365] phosphoserine aminotransferase, Methanosarcina type 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0861672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAGC ATCTTACCCT TCCAACAAAT AAACCTCAAG TTACTCATTT CTCCTCTGGC 
CCTTGCGCCA AGCACCCTGG TTGGTCTGTG TCGAATCTGG AAAACGCCTG CTTGGGTCGT
TCTCACAGGT CTGAAGATGG CAAAGCCAAG TTATCTGAAG TGATTGAACG TTCCAAACAA
ATTCTCGGCT TACCGGCTGA TTATCGCTTA GGTATCGTTC CGGCTTCTGA CACGGGTGCA
GTGGAAATGG CCTTATGGTC GCTACTGGGA CAAAGACCTC TAGACATCTT GGCATGGGAA
AGTTTTGGTC AGGAATGGGT CAAAGATGTT GTCGATGAGT TGAAGTTACC CGATGTGCGT
CTGTTGAAAG CACCCTATGG CGGGTTGCCT AACTTAGATG AGGTTGATTT CAGCCATGAT
GTGGTGTTTT TGTGGAATGG CACGACTTCC GGCGTGAGAG TGCCGAATGG TGATTGGATC
AAAGACGATC GCCAAGGTCT AACCATTTGC GATGCTACAT CTGCCGTATT TGCGATGGAT
ATTCCTTGGG AAAAAATAGA TGTATTGACT TACTCCTGGC AAAAAGTATT GGGTGGAGAA
GCCCAGCACG GTGTGATTGT CCTCTCACCC CGTGCTGTGG AAAGACTCCA AACTTATGAA
CCAGCTTGGC CTATACCAAA AATTTTCCGC CTGTCCCAAA AAGGCAAATT AATTGAAGGC
ATTTTTAAGG GAGATACCAT CAATACACCA TCGATGTTGT GTGTGGAAGA TGCCCTAGAT
GCGTTGATTT GGGCGGAAAG TGTCGGCGGT TTACCTGGTT TAATTAGTCG TAGTGAAGCC
AACTTAGCGG CGATCGCTCA ATGGGTTAAA CAAAGCAATT GGGCTGATTT CTTGGCTGAG
AAACCAGAAA CTCGTTCTTG TACTTCAATT TGCTTAAAAA TCGTTGATGC TGCCTTTGCT
AGCTTGAGTG CAGAAGACCA AGGTAAATTT GCTAAGAAAC TAGCAAAACT ACTGGAAAAA
CAGCAAGTAG CTTACGATAT TGCCCCCTAT CGTGCTGCGC CTCCCGGACT GCGAATTTGG
GGAGGCGCTA CAGTAGAAAC TGCTGATATT GAAGCTCTGC TTCCTTGGTT AGATTGGGCA
TACGCGAATG TGAAGGCTGA GTTTGTGCCA GTAGCTTGA
 
Protein sequence
MSEHLTLPTN KPQVTHFSSG PCAKHPGWSV SNLENACLGR SHRSEDGKAK LSEVIERSKQ 
ILGLPADYRL GIVPASDTGA VEMALWSLLG QRPLDILAWE SFGQEWVKDV VDELKLPDVR
LLKAPYGGLP NLDEVDFSHD VVFLWNGTTS GVRVPNGDWI KDDRQGLTIC DATSAVFAMD
IPWEKIDVLT YSWQKVLGGE AQHGVIVLSP RAVERLQTYE PAWPIPKIFR LSQKGKLIEG
IFKGDTINTP SMLCVEDALD ALIWAESVGG LPGLISRSEA NLAAIAQWVK QSNWADFLAE
KPETRSCTSI CLKIVDAAFA SLSAEDQGKF AKKLAKLLEK QQVAYDIAPY RAAPPGLRIW
GGATVETADI EALLPWLDWA YANVKAEFVP VA