Gene Ava_1165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1165 
Symbol 
ID3683361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1428660 
End bp1429115 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content43% 
IMG OID637716502 
Productferric uptake regulator family protein 
Protein accessionYP_321684 
Protein GI75907388 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0381194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTCT ACACAAATAC TTCGCTCAAG GCAGAATTAA ACGAAAGAGG CTGGCGTTTG 
ACCCCTCAAC GGGAAACTAT CTTACATATC TTTCAAGAAC TTCCTCAAGG CGAACACCTG
AGCGCAGAAG ATTTATATCA TCGTTTGGAA GCTGACGGTG AAGGAATTAG CCTTTCAACG
ATTTACCGGA CGTTGAAGTT GATGGCTCGG ATGGGGATTT TACGTGAACT GGAATTAGGC
GAAGGACACA AGCACTACGA AATTAACCAG CCTTATCCCC ATCATCATCA TCACCTAATT
TGTGTCAAAT GTAACTCTAC TATTGAATTC AAAAACGATT CAATCTTAAA AATTGGGGCA
AAAACTGCCC AAAAAGAAGG TTTTCACCTA CTAGACTGCC AAATGACAAT TCATGCAGTC
TGTCCCAAGT GCCAACGCGC GCTCATGCCA CTTTAG
 
Protein sequence
MTVYTNTSLK AELNERGWRL TPQRETILHI FQELPQGEHL SAEDLYHRLE ADGEGISLST 
IYRTLKLMAR MGILRELELG EGHKHYEINQ PYPHHHHHLI CVKCNSTIEF KNDSILKIGA
KTAQKEGFHL LDCQMTIHAV CPKCQRALMP L