| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1162 |
|---|
| Symbol | |
|---|
| ID | 3683358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 1424494 |
|---|
| End bp | 1425369 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637716499 |
|---|
| Product | lipoyl synthase |
|---|
| Protein accession | YP_321681 |
|---|
| Protein GI | 75907385 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0320] Lipoate synthase |
|---|
| TIGRFAM ID | [TIGR00510] lipoate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00000484773 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTGTAA AACCAGACTG GTTGCGGGTA AAAGCGCCTC AATGGGAGCG CGTTGGTAAC
GTTAAAGAAA TTTTGCGGGA TTTAGCGCTA AATACAGTTT GTGAGGAAGC GTCATGTCCG
AACATTGGTG AATGCTTCCA AGCTGGTACA GCCACATTTT TGATTATGGG GCCAGCCTGC
ACCCGTGCTT GTCCTTATTG CGATATTGAT TTTGAGAAAA AACCCAAAGC TCTCGACCCC
ACAGAACCCA CACGATTAGC TGAAGCTGTG CGGCGGATGA GACTAAATCA TGTAGTCATC
ACTTCCGTAA ACCGAGATGA TTTACCAGAT GGTGGTGCAT CGCAGTTTGT TAAGTGTATA
GCAGAGGTGC GCGCGGTTTC GCCTCAAACC ACAATTGAGG TGCTAATCCC TGATTTGTGC
GGTAACTGGG AGGCGTTAAA GATAATTCTT CAAGCATCAC CAGAGGTATT AAACCATAAT
ACAGAAACAA TTCCTCGCCT TTATCGACGA GTCAGACCCC AAGGCAACTA CGATCGCACC
CTAGAATTAT TGCAGCGATC GCGTCAAATT GCTCCCTGGC TCTACACAAA ATCCGGTATC
ATGGTCGGCT TAGGCGAAAC TGATGCCGAA GTTCGCCAAG TTATGCAAGA CCTACGCGCT
GTAGATTGCG ATATCCTCAC AATCGGGCAA TATCTCCAAC CCAGTCAAAA GCACTTGCAA
GTTAACGATT TTGTTACTCC AGAACAATTT GCTGCTTGGC AAGCCTATGG TGAAGAAATC
GGATTTCTAC AAGTTGTATC CTCACCTTTG ACGAGAAGTT CTTACCACGC CGAACAAGTA
CGACAATTAA TGGAGCGTTA CCCCCGGAAC AAATAG
|
|---|
| Protein sequence | MTVKPDWLRV KAPQWERVGN VKEILRDLAL NTVCEEASCP NIGECFQAGT ATFLIMGPAC
TRACPYCDID FEKKPKALDP TEPTRLAEAV RRMRLNHVVI TSVNRDDLPD GGASQFVKCI
AEVRAVSPQT TIEVLIPDLC GNWEALKIIL QASPEVLNHN TETIPRLYRR VRPQGNYDRT
LELLQRSRQI APWLYTKSGI MVGLGETDAE VRQVMQDLRA VDCDILTIGQ YLQPSQKHLQ
VNDFVTPEQF AAWQAYGEEI GFLQVVSSPL TRSSYHAEQV RQLMERYPRN K
|
|---|
| |