Gene Ava_1160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1160 
Symbol 
ID3683355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1420950 
End bp1421402 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content41% 
IMG OID637716496 
ProductMerR family transcriptional regulator 
Protein accessionYP_321679 
Protein GI75907383 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000138193 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGAGA CATTTTTTAC AAGTAAGGAA GCTTCTAAAA TTACAGGTTG TACACTCCGT 
CAACTCCAGT ATTGGCGGGA AAAAGGGGTG GTTGTTCCTG TTATTAGTGA TACGGGGACA
GGACGTAGTA TTTATTACTC AAAAACCAAT TTAGTAGAAT TGGCAGCTAT GGTATATTGG
CTGTCTGTAG GTTTGAGTTT TGATATTGCT TGCGAAACTT TGAAAACACT GAAAGACCAA
GAGCCAGAGT TGTTTAGTTC GGGTACAGGT AGACGCTTTA TGTTGTTGTC AGAAGCACAG
GAGCGATCGC CGTTAGGTGC GCCAAAGATA TCGCTTGAGC TTATGGAGTT TGACAGAACA
AAAGCGATCG CATCTTTAGA TGAAGGCAAA CCTGTAATTC CGGTGTGGTT GGATGAGATT
TATCAGCAAC TACAACAAAA ATTAAAAGCT TAA
 
Protein sequence
MQETFFTSKE ASKITGCTLR QLQYWREKGV VVPVISDTGT GRSIYYSKTN LVELAAMVYW 
LSVGLSFDIA CETLKTLKDQ EPELFSSGTG RRFMLLSEAQ ERSPLGAPKI SLELMEFDRT
KAIASLDEGK PVIPVWLDEI YQQLQQKLKA