Gene Ava_1134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1134 
Symbol 
ID3683525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1388578 
End bp1389672 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content39% 
IMG OID637716470 
Productcyclic nucleotide-binding domain-containing protein 
Protein accessionYP_321653 
Protein GI75907357 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.081073 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAA TTCTCCTGAA AGAGTTAACT AAAAGTGATA TTGATTGGAT GATTACTACC 
GGTAATCAAC AAGAATTAGC GGCTGGTACT ATTCTTATTC AAGAAAGAGG AAGTACTGAG
TTTTTTCATA TTTTATTAGA TGGTACATTT AGCGTCACTC TCTCCCAACC AGAAAATAAT
CCTCTAACTC GTGCATTCGC AGCTATTGAA GGTGAAGAAA TTTCAGGTAG AGAGATTGGG
AGATTATCTA GAGGTGAGAT AGTCGGAGAA AGTCCCTTGA TTGGGACACG TCCACCAGCC
ACTACAATTA CATCTGTAGA AAAGTCCCTG GTGATATCAA TCCCAATAAG AGAATTAGCA
GCCAAATTAC AGCAAGATGT GGGTTTTGCG GCGCGTTTTT ATCGAGCGAT CGCCATCATT
ATTTCCAATA GAATAGAAAA TACCATCGAT CAACTTGGTC GTCGTAACCT AGCACAAAGT
CAGCCTTTAC GAGATGTACT GTTTATTTTA GGAGAATTAC ACGATAGTGA CATCGATTGG
ATGATGGCTT CTGGTACTCC ACAAAAAATT CCCGCTAATA CCATACTCAT TCACGAACAA
GGAACTGTAG ACGCGCTGTA TATTCTTCTC GATGGAAAAA TGTCTTTGTC TATTTCTCTA
GATGAACGAA ATCCTTTAGT GCGTGCTTTT GCAGCTATTG AAGGTAATGA GATTTCTGGT
AGAGAAATAG CCAAATTATC CAAAGGTGAA ATCATCGGAG AAACACCCTT TATTGATGGT
AGTTTACCCC CTACAACTGT TAAAGCAATT GAACATTCTG TAGTGTTATC GATTCCCCGA
CAGCAACTAG CCGCAAAATT ACAACAAGAT ATAGGATTTG CATCAAGATT TTATCGGGTA
ATTGCTAGTT TGCTTGATCA AAGATTACAA CCAATGGTGA GTCAGCTTGG CTATGGTAGG
CGAGTTTATA GCCGGGGTGA ATCTTTACAT GAAGGGCTAG AGTATGACGA TGAATTAGAT
ATTAACACTT TAGATAGAAT GGCGATCGCT GGTAAAAGAT TTGATTGGAT GTTGGAAAGA
TTAAAAGTAA GTTAG
 
Protein sequence
MTEILLKELT KSDIDWMITT GNQQELAAGT ILIQERGSTE FFHILLDGTF SVTLSQPENN 
PLTRAFAAIE GEEISGREIG RLSRGEIVGE SPLIGTRPPA TTITSVEKSL VISIPIRELA
AKLQQDVGFA ARFYRAIAII ISNRIENTID QLGRRNLAQS QPLRDVLFIL GELHDSDIDW
MMASGTPQKI PANTILIHEQ GTVDALYILL DGKMSLSISL DERNPLVRAF AAIEGNEISG
REIAKLSKGE IIGETPFIDG SLPPTTVKAI EHSVVLSIPR QQLAAKLQQD IGFASRFYRV
IASLLDQRLQ PMVSQLGYGR RVYSRGESLH EGLEYDDELD INTLDRMAIA GKRFDWMLER
LKVS