Gene Ava_1124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1124 
Symbol 
ID3683515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1372313 
End bp1373740 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content42% 
IMG OID637716460 
Producthypothetical protein 
Protein accessionYP_321643 
Protein GI75907347 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.447668 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.160467 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCATA TATTTACAGA TAATTCTTCT ACCACAGACT TGGGCTTTGG CAAACAACCA 
CTGTTGGGTT GGCTAGCAAT ATTATCTCTA GTCTTGTTCT CAGCCGTGTG CATTTTCGGT
GGTGCAGCTG GCATTCTCCG TACAGCTTAT GTAATTATAT CCTTCGCTGT CGGTGCTTTC
TTATATGTGC GATACCCCGT ACTTTACACA GGTTTTGCGT GGTGGATCTG GTTTGTTACA
CCATTTATAG CTCGTGTAGT TGATTATAAA AGTGGTTGGG ACCCCACACG TTTTATGTTG
GTGTCGCAAT ACTTGGTGAC ACTATTAACA TTACATACCT TCCTGAAAGA GCTACCAAAA
TCGTTGCGCC AAGGTAGTCT ACCCTTTGTT CTGGCCTTTC TAGGTGTGTT TTATGGCTTT
CTCATAGGCA TGATTAAAAC AACACCCTTC ACGGCGGCGC GGGGGCTTCT AGATTGGTTA
ACCCCAATCA CCTTTGCTTT TTATCTATTC GTTCACTGGC GTGACTATCC CTTGTATCGC
CGTACTATTG AGCGTACCTT TACCTGGGGT GTATTGGTGA CAGGAATCTA TGGAATTGTG
CAGTTTCTCA ACCCTCCTGA ATGGGATTTG TTTTGGTTAA CCAGTACAAA ATTAACTAGT
ATGGGTGATC CTGAACCTCT GAAACTGCGT ATTTGGAGTA CAATGGCATC CCCCGCACCT
TATGCAGCCA TGATGATGGC TGGCTTGTTG TTATTATTTA CCAATAAAAG TTTTATTCGC
CTTCCTGCTT CGGCGGCTGG TTATTTGGCT TTTTTGCTGA CAACAGTACG CACCTTGTGG
GGAGGATGGT TGATAGCTTT TCTAACTTTT TTAACTTCAT TAAAAACCCG GTTACAACTA
CGCCTATTTA TCACTATTTT AATTATGGCG TTGTGTGTAA TTCCTTTAAC ACAAATAGAG
CAATTTTCTA AACCCATCAC CACTCGCTTT GAAACTTTTT CTAATCTTGA GGATGATGAT
AGTGCTAGGG TCAGACAGAA AATCTATGAA GATGGTCTTA ATAGTGCTTT AACTAATGCT
TTGGGTAATG GAGTAGGCAA CACTTTTATT GTGAATGAAA AAGGCGTATT AGAACCGATT
GTCGTTGATA GCGGCATTCT GGATATGTTT TTCACATTGG GTTGGTTTGG CGGTGTATTC
TACTTACTGG CATTATTTAT GGTGTTTACC CAAGCATTCC AATATTCAGA GTATAGTTTT
GACTCTTTCA TGGCTGCGGC TAGAGCTATT AGTCTGGGTA TGTTATCAAC ATTATTGGGT
AATAGTGGGA TGTTGGGGAT GCCGGGTATG GTTCTTTGGA GCTTTATCGC TATGGCTATG
GCGGGGCATA AATATCACGC ACAGCAAAGA ATAAGAGACC ATTTATAA
 
Protein sequence
MNHIFTDNSS TTDLGFGKQP LLGWLAILSL VLFSAVCIFG GAAGILRTAY VIISFAVGAF 
LYVRYPVLYT GFAWWIWFVT PFIARVVDYK SGWDPTRFML VSQYLVTLLT LHTFLKELPK
SLRQGSLPFV LAFLGVFYGF LIGMIKTTPF TAARGLLDWL TPITFAFYLF VHWRDYPLYR
RTIERTFTWG VLVTGIYGIV QFLNPPEWDL FWLTSTKLTS MGDPEPLKLR IWSTMASPAP
YAAMMMAGLL LLFTNKSFIR LPASAAGYLA FLLTTVRTLW GGWLIAFLTF LTSLKTRLQL
RLFITILIMA LCVIPLTQIE QFSKPITTRF ETFSNLEDDD SARVRQKIYE DGLNSALTNA
LGNGVGNTFI VNEKGVLEPI VVDSGILDMF FTLGWFGGVF YLLALFMVFT QAFQYSEYSF
DSFMAAARAI SLGMLSTLLG NSGMLGMPGM VLWSFIAMAM AGHKYHAQQR IRDHL