Gene Ava_1119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1119 
Symbol 
ID3683510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1366773 
End bp1367741 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content43% 
IMG OID637716455 
Productglycosyl transferase family protein 
Protein accessionYP_321638 
Protein GI75907342 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0834441 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTT CTGTTATCGT CTCTAATTAC AACTATGCTC GTTATCTTTC TAGAGCAATC 
AACTCTGTTC TCACTCAAAC ATACTCAGAC ATTGAAATCG TTATCGTAGA TGATGGTTCT
ACAGATAACA GCCGTGATGT TATTACCCAA CTGCAAGAAC AAGCACCGGA TAAAATCAAG
CCCATCTTTC AAGCAAATCA AGGACAGGGA GGCGCTTTCA ATGCGGGGTT TGCGGCGGCG
ACTGGCGAAG TCGTAGCTTT TCTGGATGCA GATGATGTGT GGAAACCTCA TAAATTACAG
CGCATTGTTG AGGTGTTTCA GACATCAGAT GTAGTTGGTG TCATGCACCA TTTGGATATC
ATAGATGGCA ATGACCAGAC GATTGATCAA GCTTCGACTC AAGGGCCGAA ACTGAGTGAA
GATTTAGCCT CAGTCATATT GAAGACAGGC AATGCTTGGT GTTTTCCGCC CACATCTGGA
CTAGCTTATC GCCGTGAAGC TTTGGAAAAA GTATTTCCTA TCGATCCTGT GAAATGGCGA
ATTTGGGCTG ATGGTTGCAT TATTTACTGC ACAGCCTTCC TCGGTAAAAT TAAGACATTA
CAGGAAAATT TGGCGTACTA TCGCATACAT GGCGCGAATA ATCATATAAG TGCAGCGATC
GCCACCAGCG AACAACAAGC CAAGTCCCAA GCCGGGATTG AGATGACTAA CCAATATATC
AACGACTATT TAGTACGTAT TGGTTATGGT GCAAAAGTTG ACTTATCCCG CAATCTCCAA
TATCGACGCA CGAAATATTA TCAACAATCC CAATGGGATC TCCGGGAGGT GTGGGCTATC
TCACGCTTAA TACTGGGATG GCCTTTTTAC TCTGGGAAAG AGCGAGCCTA TTACCTAGCA
CGATTTTTAT TTAAAAGTGG AAAATTTTTG CTTAGTGCCG ATGTTCATAC GGAAAGCCCC
ACAATTTAG
 
Protein sequence
MKISVIVSNY NYARYLSRAI NSVLTQTYSD IEIVIVDDGS TDNSRDVITQ LQEQAPDKIK 
PIFQANQGQG GAFNAGFAAA TGEVVAFLDA DDVWKPHKLQ RIVEVFQTSD VVGVMHHLDI
IDGNDQTIDQ ASTQGPKLSE DLASVILKTG NAWCFPPTSG LAYRREALEK VFPIDPVKWR
IWADGCIIYC TAFLGKIKTL QENLAYYRIH GANNHISAAI ATSEQQAKSQ AGIEMTNQYI
NDYLVRIGYG AKVDLSRNLQ YRRTKYYQQS QWDLREVWAI SRLILGWPFY SGKERAYYLA
RFLFKSGKFL LSADVHTESP TI