Gene Ava_1111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1111 
Symbol 
ID3678526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1354996 
End bp1356009 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content35% 
IMG OID637716447 
Productglycosyl transferase family protein 
Protein accessionYP_321630 
Protein GI75907334 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.671867 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAT TACTCACTAT TGCTCTCCCC ACATATAATC GAGCTAAATT ACTTGACCAA 
CAATTAGCAT GGCTAGCTAA AGCCATCAAA GGTTTTGAAT CTGAATGTGA AATCATTATT
TCTGATAATT GTTCAGAAGA TAATACCCAA GAAATCGTGA AAAAATGGCA GATGGCTTTG
CCTGAAACAG CTTTTCACTC TAACAGAAAT AGTCAAAATC TGGGAGTGAT GAGAAACATC
GCTTATTGCC TTAATGCTGC AACCAGCCAA TATGTTTGGA CAATCAGTGA TGATGATAAA
ATCGAGGACA CAACGATTTC TTATCTCATC AACACATTAA AGACATCAGT TAATTTAGGA
CTGCTGATTT TAAATTTTTC TTGTCGCCAT GAAGTAACAG GTGAGTTATT GTACGAACGC
TGTTATCAGA TTGAAGATGA AATTGTTGAG ACTGATGGTA GGGCAGTTTT TGAACGTTGT
ATCCAAGAAA GTCGCTCTGG GGTACAACTA ATGTCAGCCC AAGTATATAG AACAGATTTA
GCACAACGTG CGTTAAAAAC TTGGTCTGAT GGGGTAAATA ACTTAGATTA TCAAGTATAT
TTAACTGGGT TCTGTGCTTT TCATGGAAAT GTCAGAATCA GCAAAGATGT ATATCTAGAA
AATGCTTTTG GTGCTAGCCA TTGGATGGTT AAACCAAAAA TGTTGCTGAA AATGCAATAT
ACATATTCAC CAGAGGTAAA TATCAAGCTG AAAGAAATAG GCTATTCAGA TAGTTTTTGC
AGAAACCTGG TTATCAATCA TTTTAATAAT AATAATTGGC GGGTTCTATT AGGGGCTTTA
AGAAGATGGC CTGTTCTAGC ATTGACCACA GTAATTCCTT ACTTTGGGCT AGTCAGTTTA
TCAGTTTTAG AAACTATTAT TCTTACTAAA GAAGGGGTTT CGCAAGAAGT TATCAGTAGA
AGTAATAGTA ACAACAGACG TGACTTAATG AAATCTGATA GTAAGACAAA GTGA
 
Protein sequence
MNKLLTIALP TYNRAKLLDQ QLAWLAKAIK GFESECEIII SDNCSEDNTQ EIVKKWQMAL 
PETAFHSNRN SQNLGVMRNI AYCLNAATSQ YVWTISDDDK IEDTTISYLI NTLKTSVNLG
LLILNFSCRH EVTGELLYER CYQIEDEIVE TDGRAVFERC IQESRSGVQL MSAQVYRTDL
AQRALKTWSD GVNNLDYQVY LTGFCAFHGN VRISKDVYLE NAFGASHWMV KPKMLLKMQY
TYSPEVNIKL KEIGYSDSFC RNLVINHFNN NNWRVLLGAL RRWPVLALTT VIPYFGLVSL
SVLETIILTK EGVSQEVISR SNSNNRRDLM KSDSKTK