| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1105 |
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| Symbol | |
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| ID | 3678520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1346818 |
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| End bp | 1349016 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637716441 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_321624 |
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| Protein GI | 75907328 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4248] Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTAC TACGTTATCT TCCTCAGGAA GAGATTATCA GCCTCAGCGT GAGTTTGGGG
CGTGGCGGTG AAGCGTGCAT TTATGCTGTA CCGTCGGCGG GTGATTGTGT GGCAAAGATT
TATCACAAGC CGACAGTTGC CCACGCCAGC AAACTCCGGG CGATGCTGGC TAACCCGCCG
GAAAATCCTA CGGCTAGTTT GGGTCATATT TCCATTGCTT GGCCGCAAGA ATTATTATGG
GGAGCAGATG AAAGCGAACG CGTCATTGGC TTTTTGATGC CGCGTATTCG GGGGATGCGT
CCTATCATCG ACTTTTACAA CCCCCGGACT CGCCGTCAAC ACTGTCCTTT ATTTAATTAT
CAGTACCTAC TGCGGACAGC GCGGAATTTG GCGGCGGCTT TTGCGGCTTT ACATAATAGC
GGCTATTCTG TAGGCGATGT CAACGAATCG AACATTTTGG TAAGTGACAC AGCCCTGGTT
ACCTTGGTAG ATACGGATTC TTTCCAAGTA TGTGACCCTG ATAATGATCT TGTTTATCGT
TGCCCGGTAG GGAAACCAGA GTTTACCCCA CCAGAACTAC AGAATAAAAT CTTTGCTCAT
CACGATCGCC AAGCTACTCA TGATTTATTT GGTTTAGGGG TGCTAATCTT CCAACTGCTG
ATGGAAGGTA CGCACCCCTT TTCTGGCATT TATCAAGGCA TTCCTGAACC ACCACCTTAT
GAAGCCAGAA TTGCGTCGGG ACATTTCACT TATAGTAAGA AACGGCAAGT ACCTTACCTA
CCTACTCCTA TCGCCCCGCC TTGGGAAATT CTCCACCCCA GCTTACAAGC GCTGTTTATT
CGTTGTTTTG AGGATGGTCA CAACGAACCC CAACTGCGCC CTAATGCCCA AGCTTGGCTA
TCGGCTATAG CTGAGGCTGA AGATTCCCTG ACTACCTGTA CAGTTAATTC TCAACATCAC
TACAGCAATC ACCTGCACAG TTGCCCTTGG TGCGAACGTG CTTTACGCTT GGGTGGTCGT
GACCCGTTTC CTTCGGTGCA AGCGATTGAA AATAGAGAAC ATCTCCGTCC CCGCATCCCC
ACCAAGAGAC GCTACGGCCA CGGCAATCAG CCTGTTAACT TGCCGCAGCC AGTGATGCCG
ATGTACCAAA GCAACTGGCA CTCACCCACC CCCAGTTTTT CACCTTACCG CAATCGCTGG
AAAGGGAAGT TTTATCCGGT AGTTTTTTGT TTGTTGGGTT TTGGGGTTTT GGGATACTTG
GATGTGGTGA CAAAGTTCAC CAGTCCTTTG GTATCGCGCA ATAATTATGC TCAACAAGCG
CTGATGCCTA AACAAGCTAA TAGTAATACC GCCCTGAGTT TTGCAGAGTA TTATCAACAG
GGTCATGCTG CTTACCAAGT GCGTGATTAT AAACAGGCAG TAGATAACTT CACCCATGCC
ATTCAGCAGG AACCAACAAA CGCCAAAGCT TTGGTGAACC GAGGTAATGC GCGTTATAAC
CTGAAAGACT ATGAAGGTGC TTTAGCCGAT TACACTGTAG CTTTGCAAAT TAATCCCAAT
GAAATCAAAG CTTTTGTGAA TCGGGGTAAC TCCCGCTTGA TGCTGGCTGA ATATAGTAAT
GATCCTGACC AACAGTATAG ATTAGCGATC GCCGACTTTA ATCACGCCCT GAAACTCAAC
GAGAAGGAAG CCGAAGCTTA TATCCGCCGG GGAATTGTCC GGTCACAAAT GGCTAAATAT
AGCAGCGATA CCATTAAAGA TTACCAAGAA GCGATCGCCG ATTTTGACCA AGCCCTGAAA
CTTAACCCCG CTAAAACCGA AGCTTACTTT CAGCGTGCTT CTGTCCGCTA TCTCATTGCC
CAATATACAG GTGATTCGAC CAAGGAATAT GATCAGGCGA TCGCAGATTT TGATCAAGCA
TTAAAAATTA ACGACAAACT AGCCAAAGTG TATCTCAAAC GTGGTATGGT GCGCTACGAA
TTAGCACAAA TTACTAGTAA TAAATCTGAT GCCAATAATG CCAAAGCTCT TGCAGATTTA
CAGCTAGCCG CCAAACTTTC TTTAGAACAA GAAGATACGG AAAGTTATCA ACAAGCACTC
AGCAGTATCT GTATCATTGA GGAAAGCAAA TGTAATGCTT TATTCCAAAG CTCTACAATG
CGAGGATATG CCAGCACCGA CTTGACAGCA AAACAGTAA
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| Protein sequence | MKVLRYLPQE EIISLSVSLG RGGEACIYAV PSAGDCVAKI YHKPTVAHAS KLRAMLANPP
ENPTASLGHI SIAWPQELLW GADESERVIG FLMPRIRGMR PIIDFYNPRT RRQHCPLFNY
QYLLRTARNL AAAFAALHNS GYSVGDVNES NILVSDTALV TLVDTDSFQV CDPDNDLVYR
CPVGKPEFTP PELQNKIFAH HDRQATHDLF GLGVLIFQLL MEGTHPFSGI YQGIPEPPPY
EARIASGHFT YSKKRQVPYL PTPIAPPWEI LHPSLQALFI RCFEDGHNEP QLRPNAQAWL
SAIAEAEDSL TTCTVNSQHH YSNHLHSCPW CERALRLGGR DPFPSVQAIE NREHLRPRIP
TKRRYGHGNQ PVNLPQPVMP MYQSNWHSPT PSFSPYRNRW KGKFYPVVFC LLGFGVLGYL
DVVTKFTSPL VSRNNYAQQA LMPKQANSNT ALSFAEYYQQ GHAAYQVRDY KQAVDNFTHA
IQQEPTNAKA LVNRGNARYN LKDYEGALAD YTVALQINPN EIKAFVNRGN SRLMLAEYSN
DPDQQYRLAI ADFNHALKLN EKEAEAYIRR GIVRSQMAKY SSDTIKDYQE AIADFDQALK
LNPAKTEAYF QRASVRYLIA QYTGDSTKEY DQAIADFDQA LKINDKLAKV YLKRGMVRYE
LAQITSNKSD ANNAKALADL QLAAKLSLEQ EDTESYQQAL SSICIIEESK CNALFQSSTM
RGYASTDLTA KQ
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