| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1091 |
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| Symbol | rimM |
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| ID | 3678565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1329402 |
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| End bp | 1330103 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637716427 |
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| Product | 16S rRNA-processing protein RimM |
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| Protein accession | YP_321610 |
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| Protein GI | 75907314 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.166922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCGTA AACAAGATAG TAAAGGGGCA GGGAGCAGGG GGCAGGGGGC AGGTGAGAAG
AAGCAGGGGG CAGGGGGCAG GGGGCAGGGG GAAAAGAAAC AGAAGAAGTC CCCAGTCCCC
AGTCCCCAGT CCCCAGTCCC CGATCCTGAC GAATGGCTAC AAATTGGTAA AATCGTTTCC
GCGCAAGGCT TATCTGGGGA AGTGCGAGTC TATCCTGACT CTGACTTTCC CGAACGCTTT
GAAGTGCCGG GAACCCGATG GTTATTACGT CCGGGGCAAA CGGAACCACA ACCTATAGAA
TTGCTGCATG GTCGTTATCT GGAGAACAAA AACTTATATG TCCTCCAGTT AGCTGGTGTA
GAAAATCGCA CCCAGTCGGA AGAATTACGG GGTTGTATGT TGTTTGTGCC AGCGAGCGAT
CGCCCAGAAC TAGGCGAAGA TGAATATCAT GTGGTCGATT TAATCGGCAT GGAAGTATTC
TTACAAACCT CCGGAGATTT GGTAGGGACT GTAGTTGATG TCATCCCGGC TGGCAATGAT
TTACTAGAAG TGAGCCTGCA TGAGCCAGTT CCTAGCGACA AAAAACCAAA AACTGTGCTG
ATTCCCTTTG TCAAGGCGAT CGCACCAGTA GTAGATTTAG AAACCCGCCG CATCGAAATT
ACTCCCCCGC CTGGGTTGTT GGAGTTAGGA AGCGGAGTGT GA
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| Protein sequence | MKRKQDSKGA GSRGQGAGEK KQGAGGRGQG EKKQKKSPVP SPQSPVPDPD EWLQIGKIVS
AQGLSGEVRV YPDSDFPERF EVPGTRWLLR PGQTEPQPIE LLHGRYLENK NLYVLQLAGV
ENRTQSEELR GCMLFVPASD RPELGEDEYH VVDLIGMEVF LQTSGDLVGT VVDVIPAGND
LLEVSLHEPV PSDKKPKTVL IPFVKAIAPV VDLETRRIEI TPPPGLLELG SGV
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