Gene Ava_1088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1088 
Symbol 
ID3678562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1326033 
End bp1326662 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content36% 
IMG OID637716424 
Producthypothetical protein 
Protein accessionYP_321607 
Protein GI75907311 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTTAA CTGAACTTCG TGCTGATCGG GTAGTTCTCC ATAATATTAG TTGGCAACAA 
TTTGAGAATT TATTAGTAAA TTTAGGTGAA AGTAGAGCAG CTAGAATTGC TTACGATGAT
GGCACTTTAG AGATTATGAC CCCATTACCA GAACACGAAT ATTATAAAGA AATAATTGGT
GACATTATCA AAGATACGGC TGAAGTTTTA GAGTTAGATT ATGAATGTTA TGGTTCAACC
ACCTGGAAAC GAGAATTAAA AAAGGCTGGG ATAGAATCTG ACAATTGCTT TTATTTCCAA
AATGAAGCCT TAATTAGAGG TAAGCTCAAG TTTGATTTAA ATCAAGACCC ACCTCCAGAT
TTAGCTTTAG AAATTGATGT TACGAGTAAA TCATTAGATA GATTTCCTCT CTATGTTCGG
TTAGGTGTGC CTGAAATCTG GTGTTATGAT GCTGGAGACA TCAAAATTTA CCAATTGCAA
GGTGAGAAAT ATATCCAAAC CGAAACAAGT TTAGTATTTC CTAATTTAAA TATTCAAGAA
ATTCCATCAC TAATTGAAAG ATACCGCATG GCGGGAAGGC GGGTTTTTCG ACAAGTAATT
AGGGAATGGG TACGAGGACA GATGGGGTAA
 
Protein sequence
MLLTELRADR VVLHNISWQQ FENLLVNLGE SRAARIAYDD GTLEIMTPLP EHEYYKEIIG 
DIIKDTAEVL ELDYECYGST TWKRELKKAG IESDNCFYFQ NEALIRGKLK FDLNQDPPPD
LALEIDVTSK SLDRFPLYVR LGVPEIWCYD AGDIKIYQLQ GEKYIQTETS LVFPNLNIQE
IPSLIERYRM AGRRVFRQVI REWVRGQMG