Gene Ava_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1080 
Symbol 
ID3678554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1311787 
End bp1315359 
Gene Length3573 bp 
Protein Length1190 aa 
Translation table11 
GC content47% 
IMG OID637716416 
Productferredoxin (flavodoxin) oxidoreductase 
Protein accessionYP_321599 
Protein GI75907303 
COG category[C] Energy production and conversion 
COG ID[COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
[COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit
[COG1149] MinD superfamily P-loop ATPase containing an inserted ferredoxin domain 
TIGRFAM ID[TIGR02176] pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAA CTTTTGCAAC TATTGACGGC AATGAAGCTG TTGCCCGTGT TGCTTATAAA 
CTGAATGAAG TAATTGCTAT CTATCCCATC ACCCCCTCTT CAGCAATGGG TGAATGGGCT
GATGCTTGGA TGGCGGAAGG TCGTCCTAAC TTATGGGGTA CGGTTCCCAG TGTGGTACAG
ATGCAAAGCG AAGGCGGGGC GGCTGGTGCG GTGCATGGGG CTTTGCAAAC GGGTTCCTTG
AGTACTACCT TCACTGCATC TCAAGGGCTA TTGTTGATGA TTCCCAATCT CTACAAAATT
GGGGGTGAAC TGACTAGTAT GGTGGTTCAC GTTGCGGCGC GCTCCTTGGC TACCCACGCC
CTATCAATTT TTGGCGACCA TAGTGATGTG ATGGCGGCGC GTGGTACGGG GTTTGCGATG
CTGTGTTCGG CTTCGGTGCA GGAAAGTCAC GATTTCGCTT TAATCGCCCA TGCGGCTACT
TTAGATACAA GGGTTTCATT TTTGCATTTC TTTGATGGCT TCCGTACCTC CCATGAAGTG
CAGAAAGTGG AACTTTTATC AGATGATGAT GTGCGATCGC TCATTAATGA AGATAAAATA
TTTGCACACC GCGCCCGCGC CCTCACTCCA GATAGTCCTT TGTTGCGGGG TACAGCCCAA
AATCCTGATG TGTTTTTCCA AGCCCGTGAA GGTGCAAACC CTTACTACAA CGCTTGTCCG
GAAATTGTCC AAGGGATTAT GGATAAATTC GGCGAACGGA CGGGGAGATA TTATCAAATA
TATGAATACC ACGGCGCGAG TGATGCCGAT CGCGTAATTA TTCTCATGGG TTCCGGCTGT
GAAACAGTAC ATGAGACAGT AGATTACCTC AACGCCCGTG GTGAAAAGGT AGGCGTTCTC
AAAGTCCGAC TATTTCGCCC CTGGGATGTA GAGAGATTTA TTCAGGCTTT ACCCGATAGT
GTACAGGCGA TAGCTGTCCT CGACCGCACC AAGGAACCGG GAAGCGCGGG AGAGCCTTTG
TATCAAGATG TAGTTACAGC GATTCATGAA GGATGGGGTG TAGGGGGGAA GTTACCTACG
GTTGTGGGTG GAAGGTATGG GCTTTCGTCG AAGGAATTTA CACCGGCGAT GGTGAAGGCT
GTGTTTGATA ATTTGGCACA AGCTACGCCG AAGAATCACT TTACTATCGG GATTAATGAT
GATGTAACGC ATACATCCCT GGAATATGAC CCCAGTTTCT CTACTGAACC GGATAACGTT
GTCCGGGCGA TGTTCTACGG GTTGGGTTCC GATGGTACAG TAGGGGCGAA TAAAAACTCA
ATTAAGATTA TTGGGGAAGG GACGGACAAC TACGCCCAAG GGTATTTTGT CTACGACTCC
AAAAAATCCG GCTCCATGAC CGTTTCTCAC CTGCGCTTCG GTTCTCAACC CATTCGTTCC
ACTTACTTGA TTGACCAAGC CAACTTTATT GGTTGTCATC ACTGGGGCTT TTTGGAACGC
ATCGAAGTTT TAAAAGCTGC TGCACAAGGG GCGACTATAT TGTTAAATAG TCCTTATGAT
GCGGGTGCTG TTTGGGAAAA TTTACCCCTG AAAGTACAGC AGCAAATTCT GGACAAGCAA
CTCAAACTTT ACGTCATCAA CGCCAATCAA GTCGCCCGTG ACAGTGGAAT GGGTGGACGC
ATTAACACCA TTATGCAGGT GTGCTTTTTT GCTTTGGCGG GGGTCTTGCC AGAAGCGCAA
GCGATCGCCA AAATAAAACA AGCGATAGAA AAGACTTATG GTAAGAAAGG GGTGGAAGTT
GTCCGGATGA ATCTGCAAGC GGTAGACCAG ACCCTAGAAA ATTTACATGA AGTGAAAATT
CCCATTGAGG AAAAAGGGAA ATGGATAGAT GAAGAAGCAC TCCTATCTAA CCAAAGTCCC
TTTCCCACCA GCGCGCCCAA GTTTGTCCGG GACATTCTGG GAAAAATCAT GGTGTGGCAA
GGTGATGACT TACCTGTAAG TACACTACCA CCTGATGGGA CATTTCCCAC AGGTACGGCT
AAATGGGAGA AGCGCAACGT CGCGCAAGAA ATTCCGGTGT GGGACACGGA TGTCTGCGTG
CAATGTAGTA AGTGTGTGAT GGTTTGTCCC CATGCGGCGA TTCGCGCTAA GGTTTATCAG
CCGGGTGAGT TAGAGAATGC ACCACCTACT TTTAAGTCAG TGGATGCTAA AGATAGAGAC
TTTGCTAACC AAAAATTCAC TATCCAAGTG GCTCCAGAAG ACTGTACAGG CTGCGCTATC
TGTGTAAATG TCTGCCCAGC CAAAAATAAA TCCGAGCCAT CCCTGAAGGC GATTAACATG
GCAAATCAGC TACCTTTAAG GGAACAAGAA AGGGATAATT GGGATTTCTT CTTGAATTTA
CCCAATCCTG ACCGACGCAA GTTAAAACTC AACCAGATTC GCCAACAACA ACTGCAAGAA
CCTCTATTTG AATTTTCCGG TGCTTGCGCT GGTTGTGGTG AGACACCTTA TGTAAAACTA
TTAACACAAT TATTTGGCGA TCGCGCAGTT ATTGCCAACG CCACTGGTTG TTCTTCCATT
TACGGCGGAA ACCTCCCCAC CACCCCCTGG ACGAAAAACA ACGAAGGACG AGGCCCGGCT
TGGTCTAATA GTTTATTTGA AGATAACGCC GAGTTTGGTT TTGGTTATCG TCTCTCTTTA
GATAAACAAG GGGAATTTGC GGCGGAACTT TTGCAACAGT TCAGCGCAGA AGTGGGAGAT
AATCTAGTTC AGTCCATCCT CAATGCAGAA CAGAAAACTG AGGCTGATAT CTGGGAACAA
CGCGAAAGAA TAGCGTTGTT AAAGCAACAG TTAGAGGGAA TCCAGACTTT TGACCCCAGC
ATCAAATCCA AAATCCAAAA TCTCAAATCC TTAGCAGATT ACCTAGTGAA GAAAAGCGTC
TGGATTATCG GCGGTGATGG TTGGGCGTAT GATATTGACT TTGGCGGTAT CGACCATATA
TTAGCTAGTG GTCGCAATGT AAATATTTTG GTGATGGATA CAGAAGTGTA TTCTAACACC
GGGGGTCAAT CTTCCAAAGC TACCCCTAAA GCAGCCGTCG CTAAGTTCGC CGCCAGTGGT
AAGCCTGCAC AAAAGAAAGA TATGGGCTTA ATGGCGATGA ATTACGGTAA CGTATATGTA
GCGAGTGTGG CATTAGGGGC AAAAGATGAC CAAACACTCA AGGCATTTTT GGAAGCAGAA
GCCTTTGACG GCCCATCAAT AATTATTGCC TACAGCCATT GCATCGCCCA CGGCATCAAC
ATGACCACGG GGATGAACCA GCAAAAAGCC CTGGTAGAAT CAGGACGCTG GTTATTGTAT
CGTTATAATC CACTGTTGCA ACAACAGGGC AAAAATCCCT TACAGTTAGA TATGCGATCG
CCTACTCAAT CAGTAGAGCA ATCAATGTAT CAAGAAAACC GCTTCAAAAT GCTGACGAAA
AGTAAGCCAG AATTAGCTAA ACAACTGCTA GAACAAGCAC AAGCAGAAGT TGATGCGCGT
TGGCAAATGT ATCAATATTT GGCAAATAGG TAA
 
Protein sequence
MSQTFATIDG NEAVARVAYK LNEVIAIYPI TPSSAMGEWA DAWMAEGRPN LWGTVPSVVQ 
MQSEGGAAGA VHGALQTGSL STTFTASQGL LLMIPNLYKI GGELTSMVVH VAARSLATHA
LSIFGDHSDV MAARGTGFAM LCSASVQESH DFALIAHAAT LDTRVSFLHF FDGFRTSHEV
QKVELLSDDD VRSLINEDKI FAHRARALTP DSPLLRGTAQ NPDVFFQARE GANPYYNACP
EIVQGIMDKF GERTGRYYQI YEYHGASDAD RVIILMGSGC ETVHETVDYL NARGEKVGVL
KVRLFRPWDV ERFIQALPDS VQAIAVLDRT KEPGSAGEPL YQDVVTAIHE GWGVGGKLPT
VVGGRYGLSS KEFTPAMVKA VFDNLAQATP KNHFTIGIND DVTHTSLEYD PSFSTEPDNV
VRAMFYGLGS DGTVGANKNS IKIIGEGTDN YAQGYFVYDS KKSGSMTVSH LRFGSQPIRS
TYLIDQANFI GCHHWGFLER IEVLKAAAQG ATILLNSPYD AGAVWENLPL KVQQQILDKQ
LKLYVINANQ VARDSGMGGR INTIMQVCFF ALAGVLPEAQ AIAKIKQAIE KTYGKKGVEV
VRMNLQAVDQ TLENLHEVKI PIEEKGKWID EEALLSNQSP FPTSAPKFVR DILGKIMVWQ
GDDLPVSTLP PDGTFPTGTA KWEKRNVAQE IPVWDTDVCV QCSKCVMVCP HAAIRAKVYQ
PGELENAPPT FKSVDAKDRD FANQKFTIQV APEDCTGCAI CVNVCPAKNK SEPSLKAINM
ANQLPLREQE RDNWDFFLNL PNPDRRKLKL NQIRQQQLQE PLFEFSGACA GCGETPYVKL
LTQLFGDRAV IANATGCSSI YGGNLPTTPW TKNNEGRGPA WSNSLFEDNA EFGFGYRLSL
DKQGEFAAEL LQQFSAEVGD NLVQSILNAE QKTEADIWEQ RERIALLKQQ LEGIQTFDPS
IKSKIQNLKS LADYLVKKSV WIIGGDGWAY DIDFGGIDHI LASGRNVNIL VMDTEVYSNT
GGQSSKATPK AAVAKFAASG KPAQKKDMGL MAMNYGNVYV ASVALGAKDD QTLKAFLEAE
AFDGPSIIIA YSHCIAHGIN MTTGMNQQKA LVESGRWLLY RYNPLLQQQG KNPLQLDMRS
PTQSVEQSMY QENRFKMLTK SKPELAKQLL EQAQAEVDAR WQMYQYLANR