Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1080 |
Symbol | |
ID | 3678554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 1311787 |
End bp | 1315359 |
Gene Length | 3573 bp |
Protein Length | 1190 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637716416 |
Product | ferredoxin (flavodoxin) oxidoreductase |
Protein accession | YP_321599 |
Protein GI | 75907303 |
COG category | [C] Energy production and conversion |
COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit [COG1149] MinD superfamily P-loop ATPase containing an inserted ferredoxin domain |
TIGRFAM ID | [TIGR02176] pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAA CTTTTGCAAC TATTGACGGC AATGAAGCTG TTGCCCGTGT TGCTTATAAA CTGAATGAAG TAATTGCTAT CTATCCCATC ACCCCCTCTT CAGCAATGGG TGAATGGGCT GATGCTTGGA TGGCGGAAGG TCGTCCTAAC TTATGGGGTA CGGTTCCCAG TGTGGTACAG ATGCAAAGCG AAGGCGGGGC GGCTGGTGCG GTGCATGGGG CTTTGCAAAC GGGTTCCTTG AGTACTACCT TCACTGCATC TCAAGGGCTA TTGTTGATGA TTCCCAATCT CTACAAAATT GGGGGTGAAC TGACTAGTAT GGTGGTTCAC GTTGCGGCGC GCTCCTTGGC TACCCACGCC CTATCAATTT TTGGCGACCA TAGTGATGTG ATGGCGGCGC GTGGTACGGG GTTTGCGATG CTGTGTTCGG CTTCGGTGCA GGAAAGTCAC GATTTCGCTT TAATCGCCCA TGCGGCTACT TTAGATACAA GGGTTTCATT TTTGCATTTC TTTGATGGCT TCCGTACCTC CCATGAAGTG CAGAAAGTGG AACTTTTATC AGATGATGAT GTGCGATCGC TCATTAATGA AGATAAAATA TTTGCACACC GCGCCCGCGC CCTCACTCCA GATAGTCCTT TGTTGCGGGG TACAGCCCAA AATCCTGATG TGTTTTTCCA AGCCCGTGAA GGTGCAAACC CTTACTACAA CGCTTGTCCG GAAATTGTCC AAGGGATTAT GGATAAATTC GGCGAACGGA CGGGGAGATA TTATCAAATA TATGAATACC ACGGCGCGAG TGATGCCGAT CGCGTAATTA TTCTCATGGG TTCCGGCTGT GAAACAGTAC ATGAGACAGT AGATTACCTC AACGCCCGTG GTGAAAAGGT AGGCGTTCTC AAAGTCCGAC TATTTCGCCC CTGGGATGTA GAGAGATTTA TTCAGGCTTT ACCCGATAGT GTACAGGCGA TAGCTGTCCT CGACCGCACC AAGGAACCGG GAAGCGCGGG AGAGCCTTTG TATCAAGATG TAGTTACAGC GATTCATGAA GGATGGGGTG TAGGGGGGAA GTTACCTACG GTTGTGGGTG GAAGGTATGG GCTTTCGTCG AAGGAATTTA CACCGGCGAT GGTGAAGGCT GTGTTTGATA ATTTGGCACA AGCTACGCCG AAGAATCACT TTACTATCGG GATTAATGAT GATGTAACGC ATACATCCCT GGAATATGAC CCCAGTTTCT CTACTGAACC GGATAACGTT GTCCGGGCGA TGTTCTACGG GTTGGGTTCC GATGGTACAG TAGGGGCGAA TAAAAACTCA ATTAAGATTA TTGGGGAAGG GACGGACAAC TACGCCCAAG GGTATTTTGT CTACGACTCC AAAAAATCCG GCTCCATGAC CGTTTCTCAC CTGCGCTTCG GTTCTCAACC CATTCGTTCC ACTTACTTGA TTGACCAAGC CAACTTTATT GGTTGTCATC ACTGGGGCTT TTTGGAACGC ATCGAAGTTT TAAAAGCTGC TGCACAAGGG GCGACTATAT TGTTAAATAG TCCTTATGAT GCGGGTGCTG TTTGGGAAAA TTTACCCCTG AAAGTACAGC AGCAAATTCT GGACAAGCAA CTCAAACTTT ACGTCATCAA CGCCAATCAA GTCGCCCGTG ACAGTGGAAT GGGTGGACGC ATTAACACCA TTATGCAGGT GTGCTTTTTT GCTTTGGCGG GGGTCTTGCC AGAAGCGCAA GCGATCGCCA AAATAAAACA AGCGATAGAA AAGACTTATG GTAAGAAAGG GGTGGAAGTT GTCCGGATGA ATCTGCAAGC GGTAGACCAG ACCCTAGAAA ATTTACATGA AGTGAAAATT CCCATTGAGG AAAAAGGGAA ATGGATAGAT GAAGAAGCAC TCCTATCTAA CCAAAGTCCC TTTCCCACCA GCGCGCCCAA GTTTGTCCGG GACATTCTGG GAAAAATCAT GGTGTGGCAA GGTGATGACT TACCTGTAAG TACACTACCA CCTGATGGGA CATTTCCCAC AGGTACGGCT AAATGGGAGA AGCGCAACGT CGCGCAAGAA ATTCCGGTGT GGGACACGGA TGTCTGCGTG CAATGTAGTA AGTGTGTGAT GGTTTGTCCC CATGCGGCGA TTCGCGCTAA GGTTTATCAG CCGGGTGAGT TAGAGAATGC ACCACCTACT TTTAAGTCAG TGGATGCTAA AGATAGAGAC TTTGCTAACC AAAAATTCAC TATCCAAGTG GCTCCAGAAG ACTGTACAGG CTGCGCTATC TGTGTAAATG TCTGCCCAGC CAAAAATAAA TCCGAGCCAT CCCTGAAGGC GATTAACATG GCAAATCAGC TACCTTTAAG GGAACAAGAA AGGGATAATT GGGATTTCTT CTTGAATTTA CCCAATCCTG ACCGACGCAA GTTAAAACTC AACCAGATTC GCCAACAACA ACTGCAAGAA CCTCTATTTG AATTTTCCGG TGCTTGCGCT GGTTGTGGTG AGACACCTTA TGTAAAACTA TTAACACAAT TATTTGGCGA TCGCGCAGTT ATTGCCAACG CCACTGGTTG TTCTTCCATT TACGGCGGAA ACCTCCCCAC CACCCCCTGG ACGAAAAACA ACGAAGGACG AGGCCCGGCT TGGTCTAATA GTTTATTTGA AGATAACGCC GAGTTTGGTT TTGGTTATCG TCTCTCTTTA GATAAACAAG GGGAATTTGC GGCGGAACTT TTGCAACAGT TCAGCGCAGA AGTGGGAGAT AATCTAGTTC AGTCCATCCT CAATGCAGAA CAGAAAACTG AGGCTGATAT CTGGGAACAA CGCGAAAGAA TAGCGTTGTT AAAGCAACAG TTAGAGGGAA TCCAGACTTT TGACCCCAGC ATCAAATCCA AAATCCAAAA TCTCAAATCC TTAGCAGATT ACCTAGTGAA GAAAAGCGTC TGGATTATCG GCGGTGATGG TTGGGCGTAT GATATTGACT TTGGCGGTAT CGACCATATA TTAGCTAGTG GTCGCAATGT AAATATTTTG GTGATGGATA CAGAAGTGTA TTCTAACACC GGGGGTCAAT CTTCCAAAGC TACCCCTAAA GCAGCCGTCG CTAAGTTCGC CGCCAGTGGT AAGCCTGCAC AAAAGAAAGA TATGGGCTTA ATGGCGATGA ATTACGGTAA CGTATATGTA GCGAGTGTGG CATTAGGGGC AAAAGATGAC CAAACACTCA AGGCATTTTT GGAAGCAGAA GCCTTTGACG GCCCATCAAT AATTATTGCC TACAGCCATT GCATCGCCCA CGGCATCAAC ATGACCACGG GGATGAACCA GCAAAAAGCC CTGGTAGAAT CAGGACGCTG GTTATTGTAT CGTTATAATC CACTGTTGCA ACAACAGGGC AAAAATCCCT TACAGTTAGA TATGCGATCG CCTACTCAAT CAGTAGAGCA ATCAATGTAT CAAGAAAACC GCTTCAAAAT GCTGACGAAA AGTAAGCCAG AATTAGCTAA ACAACTGCTA GAACAAGCAC AAGCAGAAGT TGATGCGCGT TGGCAAATGT ATCAATATTT GGCAAATAGG TAA
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Protein sequence | MSQTFATIDG NEAVARVAYK LNEVIAIYPI TPSSAMGEWA DAWMAEGRPN LWGTVPSVVQ MQSEGGAAGA VHGALQTGSL STTFTASQGL LLMIPNLYKI GGELTSMVVH VAARSLATHA LSIFGDHSDV MAARGTGFAM LCSASVQESH DFALIAHAAT LDTRVSFLHF FDGFRTSHEV QKVELLSDDD VRSLINEDKI FAHRARALTP DSPLLRGTAQ NPDVFFQARE GANPYYNACP EIVQGIMDKF GERTGRYYQI YEYHGASDAD RVIILMGSGC ETVHETVDYL NARGEKVGVL KVRLFRPWDV ERFIQALPDS VQAIAVLDRT KEPGSAGEPL YQDVVTAIHE GWGVGGKLPT VVGGRYGLSS KEFTPAMVKA VFDNLAQATP KNHFTIGIND DVTHTSLEYD PSFSTEPDNV VRAMFYGLGS DGTVGANKNS IKIIGEGTDN YAQGYFVYDS KKSGSMTVSH LRFGSQPIRS TYLIDQANFI GCHHWGFLER IEVLKAAAQG ATILLNSPYD AGAVWENLPL KVQQQILDKQ LKLYVINANQ VARDSGMGGR INTIMQVCFF ALAGVLPEAQ AIAKIKQAIE KTYGKKGVEV VRMNLQAVDQ TLENLHEVKI PIEEKGKWID EEALLSNQSP FPTSAPKFVR DILGKIMVWQ GDDLPVSTLP PDGTFPTGTA KWEKRNVAQE IPVWDTDVCV QCSKCVMVCP HAAIRAKVYQ PGELENAPPT FKSVDAKDRD FANQKFTIQV APEDCTGCAI CVNVCPAKNK SEPSLKAINM ANQLPLREQE RDNWDFFLNL PNPDRRKLKL NQIRQQQLQE PLFEFSGACA GCGETPYVKL LTQLFGDRAV IANATGCSSI YGGNLPTTPW TKNNEGRGPA WSNSLFEDNA EFGFGYRLSL DKQGEFAAEL LQQFSAEVGD NLVQSILNAE QKTEADIWEQ RERIALLKQQ LEGIQTFDPS IKSKIQNLKS LADYLVKKSV WIIGGDGWAY DIDFGGIDHI LASGRNVNIL VMDTEVYSNT GGQSSKATPK AAVAKFAASG KPAQKKDMGL MAMNYGNVYV ASVALGAKDD QTLKAFLEAE AFDGPSIIIA YSHCIAHGIN MTTGMNQQKA LVESGRWLLY RYNPLLQQQG KNPLQLDMRS PTQSVEQSMY QENRFKMLTK SKPELAKQLL EQAQAEVDAR WQMYQYLANR
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