| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1074 |
|---|
| Symbol | |
|---|
| ID | 3678587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 1305275 |
|---|
| End bp | 1307086 |
|---|
| Gene Length | 1812 bp |
|---|
| Protein Length | 603 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637716410 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_321593 |
|---|
| Protein GI | 75907297 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.47301 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCCAA TTTATCGTTA TACTAAACAG GCTCAAATTA TTACTGCTTT AATTTTGACT
GGCATTCTAT CTGTTGGTAG TGGGTTGACA CTGATAAAAA ACGCCAGCGC TTCATCTATC
GATTTTTTAG CCGAAACGCC AAATGAACGT CTCAAACAAA ATGTTCGAGT GAACCGTTTA
CCGCGCCTTG TAGCTAATGC TGTGTTGCGG GATTTATCAA ATAGAGAAGG AATTTCTTCC
CTCTTTTTGA AAATCACTGA TTATCGTCAA CAAACTTGGC GTAATGGTTG TTTAGAACTA
CAGCGACCGG ATGAACTCTG TTCTCAGGCT TTAGTTCCAG GTTGGCGAGT TGTAGTTTCT
CGCGGTCAAC AAAGTTGGAT TTATCACACC AATCAAAATG GTTCTGTGGT CAGGCTAAAT
GAACGAGCTA ACACAGGTAG ATTACCTCAA AATGTGAGAA ATGCTGTGTT AGCACAGGCG
CGACAAATCT CAGGATTACC AACTAGGGCG TTGAGTATTG TGGAATTTCA GCCGACTAAC
TGGGTTGAAG GTTGTGAAGT CTCCACTTTC CCCAATCCTT GCGATCAAAT TTTAGTCTCT
GGTTGGCAAG TAACTGTAGG TGCGGGGAAT CAACGTTGGG TATTTGTCAG TAATGAAAAT
GGTGATAGAG TCCGGTTAGC AACTGGAAGT AATCCAAGTG CAAATTTACC AACATCGATT
ATAGATGAAG TGTTAGCGGA TGCTTCCAAT CGCAGTAGAA CCAAGATTGC AGTCAGTTCG
AGAAATATTA CCCAAGCAGA ACGGGTGGTT TGGAGTAATG GTTGTCTAGA TTTAGATGGG
GGCGTTTGTA CTTTCGCTCA GGTGCCTGGT TGGCGTGTTA CAGTCACAAT AGGCCGGGAA
AGGTTTGTTT ATCACACCGA CAATAACTTT TTAGTCAAGT TCAATCGTGC GGCTAGCACA
ACTACTGGTA ATGTTAACTC TGGGCAACCA ATACCTATTT CTGAAAGTGA ATTACCGCCA
CCTTTAGATA GGAATGTGGT CTTCCGCTCA ATTGCGAGTG GTGGTTTTAC TGGCAGAACC
TACGAGACAA TTTTGCTCAA TGATGGGCGA TTAATTCGTG TGCAGATTGG TGATGGGAAT
GGTTCTGAAC GCAGTGTGCG CCGTCTGAGT CGCCAAGAAT TACAGCAATT TCAGCAGTTG
CTACAACGCT ACAGAGGTGA ATTTAATAAT CTGCGCTACC CTGCGCCCAG AAGCAGTGCT
GACTTTATCA CTTACACTCT TACTAGCCAA GAGGGTACGG TCGAATACAA TGATATTTCT
GTAAATAGCG TACCGACAAA TTTACAAGCT GTCATCACCG CATGGAATCA AATTAACGAT
ACCCCAATCT CAGATGATGG TAATCTCAAC CCTGTACCGA TTCGTCCCAG TGAGTTACCA
CCACCTTTAG ATCAAGGTGT AGTATTTCGA GAAATTTCTA GCGGTGGCTT TGCGGGTAGA
ACCTACGAAA CAGTATTACG TGATGATGGT TTGTTAATCC GTGTGCGGAT TGGTGATGCT
AATGATTCTG AGCGGAGTGT GCGCCGTATT CCTGTGCAGC AAGTACGTCA ATTTCAACGG
TTGCTAGAAC GTAGATCAGA GGAGTTCCAA AATATTAATT ACCCAGCCCC TAGAGGTGCT
GCTGATTTTA TTACCTACAC TCTGACCAGC GAAGACGGTA CAGTACAGTA CAACGATGTT
TCTCAGAATA ACTTGCCGCA GGATTTACAG GGAGTGGTGC AAGCTTGGAG GGATATTGTA
GGGAATAGGT AA
|
|---|
| Protein sequence | MLPIYRYTKQ AQIITALILT GILSVGSGLT LIKNASASSI DFLAETPNER LKQNVRVNRL
PRLVANAVLR DLSNREGISS LFLKITDYRQ QTWRNGCLEL QRPDELCSQA LVPGWRVVVS
RGQQSWIYHT NQNGSVVRLN ERANTGRLPQ NVRNAVLAQA RQISGLPTRA LSIVEFQPTN
WVEGCEVSTF PNPCDQILVS GWQVTVGAGN QRWVFVSNEN GDRVRLATGS NPSANLPTSI
IDEVLADASN RSRTKIAVSS RNITQAERVV WSNGCLDLDG GVCTFAQVPG WRVTVTIGRE
RFVYHTDNNF LVKFNRAAST TTGNVNSGQP IPISESELPP PLDRNVVFRS IASGGFTGRT
YETILLNDGR LIRVQIGDGN GSERSVRRLS RQELQQFQQL LQRYRGEFNN LRYPAPRSSA
DFITYTLTSQ EGTVEYNDIS VNSVPTNLQA VITAWNQIND TPISDDGNLN PVPIRPSELP
PPLDQGVVFR EISSGGFAGR TYETVLRDDG LLIRVRIGDA NDSERSVRRI PVQQVRQFQR
LLERRSEEFQ NINYPAPRGA ADFITYTLTS EDGTVQYNDV SQNNLPQDLQ GVVQAWRDIV
GNR
|
|---|
| |