Gene Ava_1063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1063 
Symbol 
ID3678576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1294550 
End bp1294882 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content41% 
IMG OID637716399 
Producttranscriptional regulator 
Protein accessionYP_321582 
Protein GI75907286 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0576989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000107529 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAGCTG AAGCACAAAA AGATGAAAAG CTAACTTGTG AAGTGGAAAC CACTTTGAAG 
GTAATTGGCG GACGCTGGAA GGTTTTAATT ATCAGAGAAT TAATGTTAGG TATCAAACGA
TTTGGGGAAT TGCAGCGAGC CTTACCCGGA ATTACACAAA AGATGCTTAC CCAACAACTG
CGAGAAATGG AAGACGACGG GATTATACAT CGACAAGTTT ATGCACAAAT CCCCCCAAAG
GTAGAATATT CTTTAACACC TTTGGGGGAA AGCTTACAGC CAATTCTCTA TGCTATGCAC
GAATGGGGTG TGAAGCATTT AGCAAACAAA TAA
 
Protein sequence
MKAEAQKDEK LTCEVETTLK VIGGRWKVLI IRELMLGIKR FGELQRALPG ITQKMLTQQL 
REMEDDGIIH RQVYAQIPPK VEYSLTPLGE SLQPILYAMH EWGVKHLANK