Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1059 |
Symbol | |
ID | 3678572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1289541 |
End bp | 1290719 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637716395 |
Product | peptidase M20D, amidohydrolase |
Protein accession | YP_321578 |
Protein GI | 75907282 |
COG category | [R] General function prediction only |
COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
TIGRFAM ID | [TIGR01891] amidohydrolase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000000996259 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000027158 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGCTCACCC TTATTAAAGA CTTAGCCACA AAACTAGCGC CTCGCCTCAT TGAAATTCGC CGTCACATCC ATTCTCATCC CGAACTTAGC GGTCAAGAAT ATCAAACTGC TGCCTTTGTG GCTGGTGTCT TATCTTCTAG TGGTCTGCGT GTACAAGAAG GTGTTGGTAA AACTGGTGTA GTTGGTGAAT TACAAGTTAC TGAGAAAAAT CATAGTTTCT TGGCAATTCG CACAGATATG GATGCCTTGC CCATTCAGGA ACGTACTGGT TTAGAATATG CCTCAAGGGC GGATGGTGTA ATGCACGCTT GCGGTCATGA TATCCACACT ACGGTAGGTT TAGGGGCGGC AATGGTACTG TCCCAGATGA CAGAGGAGTT GGGTGGAAAT GTGCGGTTTT TATTCCAACC TGCGGAAGAA ATTGCTCAAG GTGCAAGCTG GATGGTGGCA GATGGGGCAA TCAAGGATGT TTCCGCTATT TTAGGTATTC ATGTTTTCCC TTCGATTCCG GCTGGCTCGA TTGGGGTGCG TTACGGGGCT TTAACGGCGG CGGCGGATGA TTTAGAAATT GTGATTATTG GTGAATCTGG ACATGGTGCG CGTCCCCATG AGGCGATTGA TGCGATTTGG ATCGCTTCCC AGGTGATTAC TAGTTTGCAA CAAGCCATTA GCCGCACCCA GAACCCCCTA CGTCCGGTGG TGTTGACCAT TGGGAAAATT ACTGGTGGGA GAGCGCCGAA TGTGATTGCT GATAAAGTAC AGTTGTTGGG AACAGTGCGA TCGCTCCACC CAGAAACCCG CGCCCAACTC CCCAACTGGA TTGAAAGAAT TGTTGCCAAT GTCTGCCATT CCTACGGGGC AAGTTATCAA GTAAATTATC GCCAAGGTGT CCCCGGTGTC TACAATGACT ATGGTCTAAC CCAGTTGTTT CAATCAGCAG GTGAAGAAGC TTGGACAAGC GATCGCGTCC AGGTATTACC TGAACCTTCC TTGGGTGCAG AAGATTTTTC TGTATATTTA GAACACGTTC CTGGTTCTAT GTTTCGCTTA GGTGTAGGCT ACCCTGAGCG AATTATCAAT CATCCCTTAC ATCACCCTGA ATTTGAAGTC GATGAATCTG CGATCGTCAC AGGTGTGGTA ACTATGGCTT ACGCTGCTTA CAAATATTTG CGGGGATGA
|
Protein sequence | MLTLIKDLAT KLAPRLIEIR RHIHSHPELS GQEYQTAAFV AGVLSSSGLR VQEGVGKTGV VGELQVTEKN HSFLAIRTDM DALPIQERTG LEYASRADGV MHACGHDIHT TVGLGAAMVL SQMTEELGGN VRFLFQPAEE IAQGASWMVA DGAIKDVSAI LGIHVFPSIP AGSIGVRYGA LTAAADDLEI VIIGESGHGA RPHEAIDAIW IASQVITSLQ QAISRTQNPL RPVVLTIGKI TGGRAPNVIA DKVQLLGTVR SLHPETRAQL PNWIERIVAN VCHSYGASYQ VNYRQGVPGV YNDYGLTQLF QSAGEEAWTS DRVQVLPEPS LGAEDFSVYL EHVPGSMFRL GVGYPERIIN HPLHHPEFEV DESAIVTGVV TMAYAAYKYL RG
|
| |