| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1046 |
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| Symbol | |
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| ID | 3678598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1274851 |
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| End bp | 1276260 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637716382 |
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| Product | sugar transferase |
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| Protein accession | YP_321565 |
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| Protein GI | 75907269 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
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| TIGRFAM ID | [TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00240501 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTTATTA GTATTATTGC TGGAAAAAAA ATCAGCAATT CACATCAGAC ACGTAACATC
CTCTGTGTAT TGCTGCTGAT AGGGGATATT TTGGGTTTGG TGTTGAGTTA TTCCATCTGT
TTATGGTTGC GATTGGGTAA CAATCTGCAT GGTTTTGACC CGTTAATTTA TATCTTTTTC
TTTCTAGTTC TCACAGGTTT GTATTTAGCA GATACCTACC ATCCAGATAG GCAAATAGCA
GGTTTACGCG CCCCATCCCG CATTCTGATT AGTAATTTTG TAGTTGGCGC TATTATTGCA
GCACTCATTT ACCTTACCAG TGCTTGGGGA ACAGACTTGC TTTTGAAACG GGGAGTTTGG
CTTCCTAGCT TAGGGCTATT TACTATCTGG GCTGTGGGAT TAAGAATAGG GGCAGCAAAC
TGGGCAAAAG CCCAAGCTCA ACACAGCCGT TGGTTAATTT TGGGCGCAGG TAAAAAAGCC
ATCCTCTTCG GCAAAACTTT TCTCGAACGT AGTTCGTTGG GGCGCTTGAT TTTTCTCTCC
ACCGGAGAGC AGAACAGCAA TGAGTTAACA GAAAATCATC AAGTTTCTGT AGGGAGTCTT
AATGACTTAC CTCAATGGAG CCAACAACAT TGGTCAGGGG TAGTAGTGAC GACTCCAACA
GAGTTATCTG ACGTACAAAT GCAACAACTG ATGCAGTTGC GTTTATCTGG TGTCTCCATC
TACGGTCTTC CCGATGTTTG TGAAACCTTG TGGTATAAAC TTCCCTCGTC TCTGCTTCAG
GATAATTGGC TGGCTTTTGG TAATGGTTTT AATTTAACTG CTGACAGCAT TAGTCAAAAG
CTCAAGCGCT CAGTAGATAT TATACTGACG TGCTGTTTAT GTGCATTTTT ATCTCCATTG
ATGTTGTTGG CAGCTTTAGC AATTAAGTTA GATAGCCCTG GCCCTGTGTT CTACTCTCAA
ATACGGACTG GACTAGAAGG TAAGCCTTTT AAAGTTTACA AATTTCGCTC CATGTATCAA
GATGCCGAAA AACGTGGGGC GCAGTGGGCA GATGAACGAG ACCCGCGAAT TACCAGGGTA
GGGCGTTGGT TACGCCTAAC TAGAATTGAT GAATTACCGC AGATATTAAA CGTTATCTGG
GGAGAAATGA GCCTCATTGG CCCTCGCCCA GAACGACCAG AATTTGATGT CAAACTGCGT
CAAGAAATTC CCTATTATGA TTTGCGTTAT GTGGTCAAAC CCGGTATTAC AGGCTGGGCG
CAGGTCATGT ATCCCTACGG TGCATCAATA GAAGATGCTT ACGAAAAGCT AGCTTATGAC
CTCTACTACA TCAAGAATTA CTCCCTAGCT TTAGATTTAG CGATCGCTCT TAAAACTATT
CGAGTAGTAT TACTAGGTAA AGGTAGATGA
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| Protein sequence | MVISIIAGKK ISNSHQTRNI LCVLLLIGDI LGLVLSYSIC LWLRLGNNLH GFDPLIYIFF
FLVLTGLYLA DTYHPDRQIA GLRAPSRILI SNFVVGAIIA ALIYLTSAWG TDLLLKRGVW
LPSLGLFTIW AVGLRIGAAN WAKAQAQHSR WLILGAGKKA ILFGKTFLER SSLGRLIFLS
TGEQNSNELT ENHQVSVGSL NDLPQWSQQH WSGVVVTTPT ELSDVQMQQL MQLRLSGVSI
YGLPDVCETL WYKLPSSLLQ DNWLAFGNGF NLTADSISQK LKRSVDIILT CCLCAFLSPL
MLLAALAIKL DSPGPVFYSQ IRTGLEGKPF KVYKFRSMYQ DAEKRGAQWA DERDPRITRV
GRWLRLTRID ELPQILNVIW GEMSLIGPRP ERPEFDVKLR QEIPYYDLRY VVKPGITGWA
QVMYPYGASI EDAYEKLAYD LYYIKNYSLA LDLAIALKTI RVVLLGKGR
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