Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1041 |
Symbol | |
ID | 3678593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1265694 |
End bp | 1266956 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637716377 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_321560 |
Protein GI | 75907264 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000238759 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0144782 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAGATTT TACATCTTAG CACTTACGAT AATCGCGGTG GAGCAGCAAT AGCTACCTAT CGATTACACG ATGGGCTACA AAATATTGGC ATAACTTCCC AGATGCTTGT ACAAATTAAA TTTAGTGACG ATAAATCTGT TATTGCAACA GGCAACAAAA TAGTTCATAA ATATCCCAAA CTTAAACCCC ATTTAGATTC GTTACCGAAA CTATTTTTTA GACATATCGA TAAGAGTCGA AGAACTTCAT ACTCTTTGCA ATGGCTTCCA GATTCTATAG CGACTAGCAT TATAAAAATA GATACTGATA TCATTCATCT TCATTGGATA TCAGGAGGAC TTATAAATAT AGAAACAATA GCTAAATTAA ATAAACCGCT TGTTTGGACT CTACATGATA TGTGGGCTTT TACTGGTGGA TGTCATTATA ATCAAGAGTG TCAGCTTTAC AAAGAAAACT GTGGCAACTG CCCACAAATG CCAAAAAGAT TCAATATAGA TTTATCTAGT TGGGTATGGG AACGCAAAGC TAAGGCTTGG GCTGATTTAA ACTGTACAGT TGTAACTCCA AGTCATTGGT TAGCTAAATG CGCTGCATCC AGTTCTCTAT TTAAAGATTG CAATATCAAA GTAATACCCT ATGGTTTAGA TACAGAAGTT TACAAGCCTT ATCAAAAAAA CTTGGTAAGA GATAAATTCA ATCTACCTCA AGACAAACTC TTAATCCTCT TTGGTGCTGA AAATGCTGCT AGTAATACAC GTAAAGGGTT TCACTTTTTA AGATGTGCAC TAGAAATATT AAAACATACT TACTGGCATG ATAAGTGTGA GCTTGTTATA TTCGGTGCAA GTAAGTCAGA TTCTATAAGT AACTTGGGTT TTAATACTCA CTATCTTGGC CGCTTAAATA ATGAATCTAC AGTAGCGCAA GTTTATTCAG CAGCAGATGT TTTTGTTGCT CCTTCGATAC AAGATAACTT GCCTAATACG GTTATGGAGT CACTTGCTTG TGGTACGCCC TGTGTTGCTT TTGATATTGG GGGAATGCCT GACATGATTA ATCATAAACA GAACGGCTAT TTAAGCCAGC CTTACAATAT TGATGACTTG GCAAATGGAA TTATTTGGGT AATAGAAGAT AAAGAGCGAC ATCAAAAGCT TTGTGCTAGT TCTTGTGCAA CAGTCAAGGA AAAATTTACA CTAGAATTAC AAGCGAAAAA TTACTTGTCT TTATATCAAA ATATATTAAA AATAAATAAT TAA
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Protein sequence | MKILHLSTYD NRGGAAIATY RLHDGLQNIG ITSQMLVQIK FSDDKSVIAT GNKIVHKYPK LKPHLDSLPK LFFRHIDKSR RTSYSLQWLP DSIATSIIKI DTDIIHLHWI SGGLINIETI AKLNKPLVWT LHDMWAFTGG CHYNQECQLY KENCGNCPQM PKRFNIDLSS WVWERKAKAW ADLNCTVVTP SHWLAKCAAS SSLFKDCNIK VIPYGLDTEV YKPYQKNLVR DKFNLPQDKL LILFGAENAA SNTRKGFHFL RCALEILKHT YWHDKCELVI FGASKSDSIS NLGFNTHYLG RLNNESTVAQ VYSAADVFVA PSIQDNLPNT VMESLACGTP CVAFDIGGMP DMINHKQNGY LSQPYNIDDL ANGIIWVIED KERHQKLCAS SCATVKEKFT LELQAKNYLS LYQNILKINN
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