Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1039 |
Symbol | |
ID | 3678591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1263527 |
End bp | 1264312 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 637716375 |
Product | glycosyl transferase family protein |
Protein accession | YP_321558 |
Protein GI | 75907262 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0644269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0130417 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCAAT TTGAATCATT ACAATTACAA TTTGATGTTA TTACAATCAC AAAAAATTGT GTTCAAAGAA TTACTGAAAC ATTGTATAGT GTAAGCTCTC AAACATATCA AAATATTAAT CACATTATTA TTGATGGTAA TTCTTGCGAT GAAACTGTAA ATACGATTAA TAAATTTAAT CATACAAAAA AAATTACAAT CTACCAGCAA AATGGTTCTG GTATTGCAAA TGCTTTCAAT ATTGGATTAA GTAAGGCTTC AGGAAAATTG GTAGTGTTTT TAAATGCAGG AGATATATTT ATTGACAAAT ATGTAATTGA AAATATTATT AATTCTTATT TTAAGAATAG CTGGTTGTGG GCATTTGGTG AAACTATCTC AGTTAGCCGG AAAGGATACT TAAGAAGGCA TATCAAACAA TATACTCAAT GGAAGCAAGA GTTTTTTTTG TATGGTAATC CTATGTGCCA TCAGTCTACT ATTTTTACTA AAGAAATTTT AGATACGTTG GGATTATATA ATGAGTTACT TCCTCTAGGA ATGGATTATG ACTTTAACAT TAGAGCTTCT TTAATAGAAG AACCACACCT TCTAAGGTTT CCGATTTCAT ACTATGAAAC TACAGGTGTA TCTTCTATGA AAGTATTTCA AGCTTACAAA GCTCATAGCG ATATTAGAAA AAAATACTTT ATGTATACTC ATCAGCGTAA TTTACAAATT GATACTATTG GCTTTATTAA GGCAATGAAA CGTTTCTTGA TGATCCCATT AAAGCTATAT TTATGA
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Protein sequence | MNQFESLQLQ FDVITITKNC VQRITETLYS VSSQTYQNIN HIIIDGNSCD ETVNTINKFN HTKKITIYQQ NGSGIANAFN IGLSKASGKL VVFLNAGDIF IDKYVIENII NSYFKNSWLW AFGETISVSR KGYLRRHIKQ YTQWKQEFFL YGNPMCHQST IFTKEILDTL GLYNELLPLG MDYDFNIRAS LIEEPHLLRF PISYYETTGV SSMKVFQAYK AHSDIRKKYF MYTHQRNLQI DTIGFIKAMK RFLMIPLKLY L
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