Gene Ava_1039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1039 
Symbol 
ID3678591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1263527 
End bp1264312 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content28% 
IMG OID637716375 
Productglycosyl transferase family protein 
Protein accessionYP_321558 
Protein GI75907262 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0644269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0130417 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAAT TTGAATCATT ACAATTACAA TTTGATGTTA TTACAATCAC AAAAAATTGT 
GTTCAAAGAA TTACTGAAAC ATTGTATAGT GTAAGCTCTC AAACATATCA AAATATTAAT
CACATTATTA TTGATGGTAA TTCTTGCGAT GAAACTGTAA ATACGATTAA TAAATTTAAT
CATACAAAAA AAATTACAAT CTACCAGCAA AATGGTTCTG GTATTGCAAA TGCTTTCAAT
ATTGGATTAA GTAAGGCTTC AGGAAAATTG GTAGTGTTTT TAAATGCAGG AGATATATTT
ATTGACAAAT ATGTAATTGA AAATATTATT AATTCTTATT TTAAGAATAG CTGGTTGTGG
GCATTTGGTG AAACTATCTC AGTTAGCCGG AAAGGATACT TAAGAAGGCA TATCAAACAA
TATACTCAAT GGAAGCAAGA GTTTTTTTTG TATGGTAATC CTATGTGCCA TCAGTCTACT
ATTTTTACTA AAGAAATTTT AGATACGTTG GGATTATATA ATGAGTTACT TCCTCTAGGA
ATGGATTATG ACTTTAACAT TAGAGCTTCT TTAATAGAAG AACCACACCT TCTAAGGTTT
CCGATTTCAT ACTATGAAAC TACAGGTGTA TCTTCTATGA AAGTATTTCA AGCTTACAAA
GCTCATAGCG ATATTAGAAA AAAATACTTT ATGTATACTC ATCAGCGTAA TTTACAAATT
GATACTATTG GCTTTATTAA GGCAATGAAA CGTTTCTTGA TGATCCCATT AAAGCTATAT
TTATGA
 
Protein sequence
MNQFESLQLQ FDVITITKNC VQRITETLYS VSSQTYQNIN HIIIDGNSCD ETVNTINKFN 
HTKKITIYQQ NGSGIANAFN IGLSKASGKL VVFLNAGDIF IDKYVIENII NSYFKNSWLW
AFGETISVSR KGYLRRHIKQ YTQWKQEFFL YGNPMCHQST IFTKEILDTL GLYNELLPLG
MDYDFNIRAS LIEEPHLLRF PISYYETTGV SSMKVFQAYK AHSDIRKKYF MYTHQRNLQI
DTIGFIKAMK RFLMIPLKLY L