Gene Ava_1037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1037 
Symbol 
ID3678705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1261886 
End bp1262452 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content41% 
IMG OID637716373 
Producthypothetical protein 
Protein accessionYP_321556 
Protein GI75907260 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.689799 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.109214 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACGTA AACTGAAATT AGTAAAGTTG ATTTTAGCGA TCGCCTTGAT ATTTACTAGT 
ATCATTACTG TGAGGATTGC GATCGCTTTT CAACAATCCC CGGTTCCACA GGCTATTTTT
GTGTTGGGCG GTGATGCTGA ACGAATGAGG TTTGCAGCAA AATTTTGGCA ATCTCACCAG
AATTTAGATA TTTGGATTTC TGACTTTGCT TGGAATTTAG ACAATAATCG TCGGATATGT
CTAAAGTTTG GTGTTCCTGA AGTAAAGTTG CATTTGGATG GGAGAGCAAC GGATACTGTG
ACTAATTTTA CAACTTTGGC TGGAGATTTT GTTGAGCAGA GGTTACAGCA TATATATTTG
ATCACGTCAG ATTATCACAT GAGAAGAGCG CAGGCGATCG CAACTATCGT CTTGGGTAGC
CAGGGGATTA TGGTTACACC TGTGGCTGTA ACGTCAAAAA ATCAGCCATC AGAATCGTTG
GTAAGAGTAT TAAGAGACGG AGGGCGATCA TTTTTGTGGA TTGTGACTAG GCGGAGTGCT
GCTAGATTTA ACTCTCGTTT GAAATAA
 
Protein sequence
MRRKLKLVKL ILAIALIFTS IITVRIAIAF QQSPVPQAIF VLGGDAERMR FAAKFWQSHQ 
NLDIWISDFA WNLDNNRRIC LKFGVPEVKL HLDGRATDTV TNFTTLAGDF VEQRLQHIYL
ITSDYHMRRA QAIATIVLGS QGIMVTPVAV TSKNQPSESL VRVLRDGGRS FLWIVTRRSA
ARFNSRLK