| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1029 |
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| Symbol | |
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| ID | 3678697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1247780 |
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| End bp | 1253242 |
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| Gene Length | 5463 bp |
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| Protein Length | 1820 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637716365 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_321548 |
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| Protein GI | 75907252 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3452] Predicted periplasmic ligand-binding sensor domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.165868 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATAGGC AGCACAAACA TCACCGATGT AATCCAGTAA ACTTTTTAAG CAAACAAAAT
TTGCTGCCGT TTTTGCTTGG TATTGTGATT TTATTGGTTG TGGTGATGCT GTGGCTAAGA
CTACAAGCCG AAGAAGAAAT CAAAATTCAA CAGTTGATCA AACAGCAAGC GATCGCCACC
CAAACTGAAT TAGTAACACA ACTGAAGACT CGCATTCTGG CATTAAAACG TATAGGTAAA
CACTGGGAAA TGCACGGCAG CATTCCCCAG GCACAATGGG AACTAGAAGC AAGAGCATAT
CTTGAAGATT ACGGAGGTTA TCAAGCCATC AAGCTGGTTG ACCCATCATG GCAAGTACTG
CGGTCTGTTT CTGTAGCAAA AAACAAAGCA GCCGAGAATT TAGAGATAAT GCCAAAATTC
CCACAATGTA AGGGAGCAAC AGCACAGCCA AGCCATGAAA CTACGCTAAC TCATACAGTT
AATCTCAACC AAGGCGATCG GGTATTTTTC GCTTGTGTAC CTTTATGGAT GGGAGATAAG
TTTGGTGGTG CGGTCTTAGG AATTTTTCAG GTTAAACAGT TCTTTGAGTC AGTTTTACAC
ATAGCACCAG GTTACAAGAT TAGAGTATTT GATGGTCAAG AGTTGATCTA TGGCCAAGAT
AGACAGTCCT CAACCCTACC ATCTTGGCAA CAGTCAGTAA ACATCAACTT TGATGGGATG
ACTTGGCAAT TGCAGATTTA CCCAACCCCA GAACTATTAA AAGATTTATA TTCACCTCTA
CCAACAGTTG TATTAGTAGC CGGAATTTTC AACGCTGGGG CAGTCACCCT ACTAATTTAT
TTTGCTCAAG CCACCAAACT TAGTAACCAT CAGATTGGCA GAATCAACCA AGAACTAGCT
GACAGAATTG AAAAACAAAC ACAGGTAGAA ATTGCCTTGC GTGCCAGTGA AAACCGTTTG
CGAGAGTTAT TAGAAACAGT CAGAGTTATA CCTTGGGAAG TTGACTTAAA AACTCAGCAT
TTCACCTATG TTGGGCCGCA AGCAGAAACT TTACTGGCAT ACCCTATTGC TCAATGGTAC
GAGGAAAATT TCTGGGACAA TCATCTACAT CCCCATGACC GAGATTGGGC TGTGAGATTT
TGCCAGGAAG CGGCCAACAA AGGGCAAAAC CACGAGTTGG AATACCGAAT GCTAGCTGCT
GACGGCAGAG TTGTCTGGTT ACGAGACGTT GTGAATGTAG TGGAAGTTGA TGGAACTCCC
GTAATGCTGC GGGGGTTCAT GTTTGATATT ACCGACCTCA AGCGAGTGGA AGAAACTTTG
AGATTACGGG AGAGAGCATT AGCCGCCAGC AGTAATGGCA TTGTTATTAG CGATGCTAAA
CTTCCCAATT ATCCAGTAAT ATATGTGAAC TCTGCCTTTG AGCAGATCAC AGGTTACAAA
GCTACAGAAA TCGTCGGACG CAACTGTCGT TTTTTGCAAG GTAACGACAC GACACAACCA
GCAATCGAAG AGTTGAGGTC AGCACTCAAA GCAGGCAAAA ATTGTAAGGT GATTCTGCGT
AACTATCGCA AAGATGGCAG TTTGTTTTGG AATCAGTTGA GCGTCTCGCC CATTTATAAC
GATAATGGCC AGTTAAGTCA CTTTATTGGG ATTCAAACTG ATATTAGCGA TCGCCAACAA
GCAGAAGCTT CTTTACGACG GCAAGCCCTC ACCTTTGAAA ATATTTACGA TGGTGTGATT
ATCACCAACT TACAAGGGCA AATTCTGGAC TGGAATCCTG CCGCAGAAAG GATGTTTGGT
TATAGCAAAG ACCATATTTG TGGACAAAGT ATTAGTATTC TGCACAAGGT AGAAGAAGAT
GCAGCCTTAA ACAGCGCCAT TATTGCAGAA ATCACCAAGC AGGGGCGCTG GTCAGGAGAA
ATTAACTTTG TGCGTCAGGA TGGTAGTCAA GGAATTTGTG AAACAACCAT CGTTGCCCTA
CAAGATGACC AGGGACAAAC TGTCGCCACA ATTAGCGTCA ATCGTGACAT TACTGAACGC
AAGCACGCTG AATTATTGCT CAGGCGTAGC GAAGAACGTT TTCAAGCTTT CATGAATCAT
AGCCCCACAC CTGCTTGGAT TACGGATATA GATGGCACAA TTGTTTATCT AAGCGAAACT
TATCGGCGGA CTTTTCAATT ACCAACACAA GAACTCATTG GTACAAATAT TTTTGATATT
TATCCACCCG AATTGATTCA AACTTTCCGA GAAACTATCC AAATAGTTGC GCGTACCCAT
CAAGTTATGG AAACTGTAGA GTCTGTACCT TGTAGTGATG GCACAGTGCG AGATTTTTTG
GTTTATAAAT TTCCCATATC TAGTAAACCT GATGAGTGTT TAATTGGCGG TATTGCTATT
GATATTACTG AACGCAAACA AGCCGAAGCA GCTCTGAGAA AAAGTGAAGA ACGTTGGCAA
TTAGTCATTG AAGGTAATCA AGACGCTATT TGGGATTGGA ATATTATCAC CAATGAAACG
TTTCGTTCTG CGCGGTGGGC AGAACTCATC AAAGAACAAA ACTATCAACC CATAGCTGAT
CATGCAGATT GCATTAGCCG CATTCATCCT GATGATTATG AGCGGGTGAT GGCAGTTAGA
CAAGATTGTC TTAGTCGGAA AATTCCTAAT TATGTGGTGG AGTATCGTTT GCGTTGCAAC
GATGACAGCT ATAAGTGGGT ATTAGTTCAT GCAACTGGTC AATGGGATGA GCGGGGTAAT
CCGGTGCGGA TGGTTGGTTC TATCAAAGAC ATTACTGAAC GCATAGAAGC GCAAGAAGCC
TTACAAAGAC AATTACACAG AACCCTATTA CTAGAAAAAA TTACCCAAAA AATTCGCCAA
AGTCTCGATA GTAAAGAAAT TTTTGAAACA GCTGCCACCC AAATTGGCCA AGCTTTAGCA
GTCGATCGCT GCCTGATACA TTCTTACATT AGTCATCATG ACCCACATAT TCCCTTAGTC
GCTGAATATA ACAACGTTCT CGATTACTGC TCAATGCAGA AATGGGAATT TACTACCACT
GGGAATCGTC ACATTTTACA AATGATGTCC CAGGATAAGG CGATCGCCTC TGCCAATGTC
TACACCGATC CTTTACTACA AACAGCAGTA CCTAGCTGCT GTGAAATTGG GGTCAAGTCC
ATGCTAGCTG TCCGCACTTC CTATCAAGGG GAGCCTAACG GAGCTATTTG TTTACATCAG
TGTAAGTATT TTCGCCAGTG GACTCCTGAA GAAATTGAAT TACTAGAAGC AGTGGCTGCT
CAATTGGGCA TAGCGTTAGC TCAAGCTCAG TTATTAGAGC AGGAAACCCG CCAACGGGAA
GAACTCACTA TCAAAAATTT TGCCTTAGAA CAAGCAAAAA GGGCAGCAGA AGCCGCTAAT
CGGGCAAAAA GCGAATTTTT GGCTATGATG AGCCACGAAA TCCGCACTCC TATGAATGCT
GTGATCGGCA TGACAGGATT ACTCTTAGAT ACGGAATTAA CTTCCCAACA ACGCGACTTT
GTGGAGACAG TTCTCACAAG TGGCGATGCT TTGTTGAGTA TTATTAATGA CATTCTGGAT
TTCTCCAAAA TTGAATCTGG TAAGTTAGAA CTGGAAGAAC AACCTTTTGA GGTGAGGACT
TGTGTAGAAC AAGTCATCGA CCTCTTAGCC GCTAAAGCTG CCCAAAAAGA TATTGAACTC
GCTTACCTGA TTCATCCCCA GGTACCCATG CAAATCGCTG GAGATTTAAC TCGCCTGCGG
CAGATTTTGA CGAATCTCCT CAATAATGCG ATCAAATTTA CCCCAGAAGG AGAAGTTGTA
GTCTCTGTGC GTAGCCAGCC ATCACCCAAC CAAAAAACCA AGAACTGCTG CGAAATTATC
TTTACCATCA AAGATACAGG TATTGGTATT GCCCCGGAAA CAATGGATTT GTTATTTCAA
CCATTTGTCC AGGCTGATGC CTCGATGACA AGAAAATATG GGGGTACAGG ACTAGGACTC
GTTATCAGCA AAAGATTGGG TGAAATGATG GGCGGCTATC TTTGGGTAGA AAGTCGGGGG
TGCGTTGGTG GAAACCCTCC CCCTGGATGG CAACGTAAAA ACTCAATCTC ATCTGCTTCT
GTGGCTACAG GTTCCACCTT TTATTTTTCT ATGACTGTGC CTGTGGTGGC TCATGCAGAT
TTAGAGACTT CCATCACTTC CCCAGTTCAA CTGAGCGGTA AACGGTTATT AATTGTCGAT
GATAATCCAA CAAATCGCCA GATTTTGAGA TTACAAGCCG AACCTTGGCA GATGGAAACT
TACACAGCCC CATCTGGTGC TGAAGCTTTA GCGCTGATAG ACCAGGGAAT GGCCTTTGAT
ATTGCCATTT TGGATGTGCA GATGCCGGAA ATGGACGGTC TGACACTGGC AAGGCAAATT
CGTCAGCGTC CCAGTTATCA ACACTTACCC TTGGTGATTT TAACTTCTTG GGGTCAACCA
GATACTGACT TGAGTGATAT CGAATTTGCA GCCTGTCTAA ATAAACCAAT TAAACAATCT
CAACTTTTTG ATGTCTTAGC TGCAAGTTTG GGCAATCAAC CTATCCGTGC TAGTGTTGTT
CCTGATCGTT CCGCTCAAGT CAATTCATGT CTGGCACAGC AGATACCTCT ACGCATTTTG
CTTGCAGAAG ATATAGTGGT GAATCAGAAA GTGGCTCTGC TGATCCTGAA AAAATTGGGT
TATCGGGCAG ATGTAGTGGC TAATGGACTA GAAGTGCTGG AAGCTTTACA ACGTCAGTCC
TATGATGTAG TGCTGATGGA TGTGAATATG CCAGAAATGG ACGGGTTGAA AGCCAGCCAA
ATCATTTGTC AAACTTGGAG TCCTCGTTCT CGTCCATATA TTATCGCTAT GACCGCTAAT
GCTATGCGGG GCGATCGCGA AGCTTGCTTG GCGGCGGGAA TGGATCACTA CATTAGTAAG
CCTTTACAAC TTGAGGAGTT AGCCAAGGCA CTGGGCAAAT GTCACCCCTC AACTAGTTCT
ACAGAGAAAG CACTGGAGAA AACCAGTAGC CAAAATCAGA CTTTTACAGA TATTAGTGAT
TTAAAATTTG CCACAATAGA TACAAAGATT TTACAAGCAT TACGGGATAT GTTAGGAGGA
GATAAAGTAG CATTTGCCGA ATTAATCAAC TGTTACCTTA CTGAATCCCC TAAATTGATT
GAAAATTTAA ATGTAGCTAT TAATACGGAA GATACCCAAG GAATATGGAA GACAGCGCAC
AAATTTAAAT CCAGTAGTGG CTCAGTTGGG GCGGTTTTTC TAGCACAACT TTGTAAATTG
CTAGAAGCTA AGGGTCGCAA TAACAATCTA GAGGGTTGTA TAGAACTTGG CTCACAGTTA
TGTCAAGAGT ATGAACTAGT CAAAACGGCT TTGTACAGAG AAGTGAACAA GGAGACACCA
TGA
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| Protein sequence | MNRQHKHHRC NPVNFLSKQN LLPFLLGIVI LLVVVMLWLR LQAEEEIKIQ QLIKQQAIAT
QTELVTQLKT RILALKRIGK HWEMHGSIPQ AQWELEARAY LEDYGGYQAI KLVDPSWQVL
RSVSVAKNKA AENLEIMPKF PQCKGATAQP SHETTLTHTV NLNQGDRVFF ACVPLWMGDK
FGGAVLGIFQ VKQFFESVLH IAPGYKIRVF DGQELIYGQD RQSSTLPSWQ QSVNINFDGM
TWQLQIYPTP ELLKDLYSPL PTVVLVAGIF NAGAVTLLIY FAQATKLSNH QIGRINQELA
DRIEKQTQVE IALRASENRL RELLETVRVI PWEVDLKTQH FTYVGPQAET LLAYPIAQWY
EENFWDNHLH PHDRDWAVRF CQEAANKGQN HELEYRMLAA DGRVVWLRDV VNVVEVDGTP
VMLRGFMFDI TDLKRVEETL RLRERALAAS SNGIVISDAK LPNYPVIYVN SAFEQITGYK
ATEIVGRNCR FLQGNDTTQP AIEELRSALK AGKNCKVILR NYRKDGSLFW NQLSVSPIYN
DNGQLSHFIG IQTDISDRQQ AEASLRRQAL TFENIYDGVI ITNLQGQILD WNPAAERMFG
YSKDHICGQS ISILHKVEED AALNSAIIAE ITKQGRWSGE INFVRQDGSQ GICETTIVAL
QDDQGQTVAT ISVNRDITER KHAELLLRRS EERFQAFMNH SPTPAWITDI DGTIVYLSET
YRRTFQLPTQ ELIGTNIFDI YPPELIQTFR ETIQIVARTH QVMETVESVP CSDGTVRDFL
VYKFPISSKP DECLIGGIAI DITERKQAEA ALRKSEERWQ LVIEGNQDAI WDWNIITNET
FRSARWAELI KEQNYQPIAD HADCISRIHP DDYERVMAVR QDCLSRKIPN YVVEYRLRCN
DDSYKWVLVH ATGQWDERGN PVRMVGSIKD ITERIEAQEA LQRQLHRTLL LEKITQKIRQ
SLDSKEIFET AATQIGQALA VDRCLIHSYI SHHDPHIPLV AEYNNVLDYC SMQKWEFTTT
GNRHILQMMS QDKAIASANV YTDPLLQTAV PSCCEIGVKS MLAVRTSYQG EPNGAICLHQ
CKYFRQWTPE EIELLEAVAA QLGIALAQAQ LLEQETRQRE ELTIKNFALE QAKRAAEAAN
RAKSEFLAMM SHEIRTPMNA VIGMTGLLLD TELTSQQRDF VETVLTSGDA LLSIINDILD
FSKIESGKLE LEEQPFEVRT CVEQVIDLLA AKAAQKDIEL AYLIHPQVPM QIAGDLTRLR
QILTNLLNNA IKFTPEGEVV VSVRSQPSPN QKTKNCCEII FTIKDTGIGI APETMDLLFQ
PFVQADASMT RKYGGTGLGL VISKRLGEMM GGYLWVESRG CVGGNPPPGW QRKNSISSAS
VATGSTFYFS MTVPVVAHAD LETSITSPVQ LSGKRLLIVD DNPTNRQILR LQAEPWQMET
YTAPSGAEAL ALIDQGMAFD IAILDVQMPE MDGLTLARQI RQRPSYQHLP LVILTSWGQP
DTDLSDIEFA ACLNKPIKQS QLFDVLAASL GNQPIRASVV PDRSAQVNSC LAQQIPLRIL
LAEDIVVNQK VALLILKKLG YRADVVANGL EVLEALQRQS YDVVLMDVNM PEMDGLKASQ
IICQTWSPRS RPYIIAMTAN AMRGDREACL AAGMDHYISK PLQLEELAKA LGKCHPSTSS
TEKALEKTSS QNQTFTDISD LKFATIDTKI LQALRDMLGG DKVAFAELIN CYLTESPKLI
ENLNVAINTE DTQGIWKTAH KFKSSSGSVG AVFLAQLCKL LEAKGRNNNL EGCIELGSQL
CQEYELVKTA LYREVNKETP
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