Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1025 |
Symbol | |
ID | 3678693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1240536 |
End bp | 1242539 |
Gene Length | 2004 bp |
Protein Length | 667 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637716361 |
Product | nitrate transport ATP-binding subunits C and D |
Protein accession | YP_321544 |
Protein GI | 75907248 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | [TIGR01184] nitrate transport ATP-binding subunits C and D |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.129474 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTAT TTGTTGCAGT TGACCAAATT GATAAGGTAT TTGAATTAAC CGGTGGTGGG AAATATATCG CCCTCAAAGG AATTGACCTC CAAATTAGAA AAGGTGAGTT TGTTTCTTTG ATTGGTCACT CCGGTTGCGG TAAGTCCACT TTATTGAATA TGATTGCTGG TTTGGATTTG CCAACTGAAG GTATAGTCAC CCTGGAAGGA CAAAGAATTA GCAGACCAGG GCCAGACCGG ATGGTGGTTT TCCAAAACTA TTCTTTGTTG CCTTGGCGGA CGGTGAGAGA AAATATTGCC CTAGCTGTCA ACTCAGTCAT GAAGGGAATG CCGGAAGCTG AACGCAAATC AATTGTAGAA AAACATATAG ATATGGTGGG TTTGCGTCCC CACGCCGATA AACAACCGGG GATGTTGTCT GGGGGACAAA AACAACGGGT AGCGATCGCC CGTGCCTTGG CAATTCGTCC TAAACTATTA CTATTGGATG AACCCTTTGG CGCTTTGGAT GCTCTGACCA GAGGGAATTT GCAAGAACAG TTAATGCAAA TCTGCGAAGA AAATGAAGTC ACGGCGGTAA TGGTGACTCA CGACGTAGAT GAAGCCGTGC TGTTGTCTGA CAGAATTGTC ATGCTGACCA ACGGCCCCGA ATCCAAAATT GGTGACATCC TAGAAGTTGA TATCCCCAGA CCCCGGAAAC GCATGGAAGT AGTAGAACAC CCAAGCTACT ACAGTTTGCG GAGTGAGATG ATTTACTTCC TCAACCAACA AAAGCGGGTG AAGAAAATTC GCGCCCGGAA AACCGCAGAT GTGGCTCGTC ACGGGTTAGA AAAAGTTAAC CTAGAAATTG GTTTCTTACC TTTGACAGCT TGCGCCCCTC TAGCTGTAGC CAAAGAAAAA GGTTTCTTTA CTAAGCATGG TTTGGATGAA GTCAACTTAG TGCGGGAAAC TAGCTGGCGG GGTATTGTGG ATGGCATGAA AGGCGGTTAT ATAGATGCTG CCCAAATGCC TTCCGGGATG CCCATGTGGT TAACCTTGGG TGGACATGAT AACCAACCCC TACCTGTGGT TACCGCCCTC ACCATGACCC GTAACGGTAA CGCCATCACC TTGGCGAAAC GCTTTTATGA TGAAGGTGTT CGCAGCTTAT CGGACTTCAA AAATTACCTC TTGCGTACCC GTGACCAACG TCACATCATG GGGGTAGTCC ATCCCGCATC CATGCACAAT TTATTGCTAC GTTACTGGTT AGCGGCTGGT GGAATTGACC CCGATTTAGA TGTGGATATG AGAACCATCC CGCCAGCGCA GATGGTAGCC GACTTGCAAA ACAAAAGTAT TGACGGTTAT TGCGTGGGTG AACCTTGGAA TTACCGCGCC GCCGTAGAAA ATATCGGCTT TACCATCGCT ACCGACTTGG AAGTGTGGTT GGGACACCCT GGCAAAGTCC TTGGGGTGCG GGAAGATTGG GCAGAAAAAT ATCCTAATAC CCACATCGCC TTGACTAAAG CTTTGCTGGA AGCCTGTGAA TATTGTTCTC GACCAGAAAA TGTCGAAGAA GTCAGAAGAA TTGTGGCAGG TAGAGATTAC GTCAGCACAG ATTTAGATTA CATTCAACTG GAAGACCCAA ATAGCCTTGT CTGTGATATA GACCACCCAT TACGAGACTA CGCCCACCAC CAGTTTTTTG CCCAGTCAGC CATCAACCGT CCCAGCCGTA CCGAACAAAT CTGGATTATG AGTCAGTTGG CGCGCTGGGG TGATACGCCT TTCCCCAGAA ACTGGGTAGA AGTTGTAGAA CGGGTTTGTC GTGTACGCGT TTTCAGTACC GCCGCCAGAG AATTAGGTCT GGACATCAGC TACACTCGCC AACCCATCGA ATTATTTGAT GGCACACCCT TTAACGCCGA CGACCCCATA GCCTATCTCA ACAGCCTGCA CATTAAGCGT GATTTCTCCA TTGCGGAAGT CATCTTAGAC TCGCCAACCA GAAGAGTAGC TTAA
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Protein sequence | MSVFVAVDQI DKVFELTGGG KYIALKGIDL QIRKGEFVSL IGHSGCGKST LLNMIAGLDL PTEGIVTLEG QRISRPGPDR MVVFQNYSLL PWRTVRENIA LAVNSVMKGM PEAERKSIVE KHIDMVGLRP HADKQPGMLS GGQKQRVAIA RALAIRPKLL LLDEPFGALD ALTRGNLQEQ LMQICEENEV TAVMVTHDVD EAVLLSDRIV MLTNGPESKI GDILEVDIPR PRKRMEVVEH PSYYSLRSEM IYFLNQQKRV KKIRARKTAD VARHGLEKVN LEIGFLPLTA CAPLAVAKEK GFFTKHGLDE VNLVRETSWR GIVDGMKGGY IDAAQMPSGM PMWLTLGGHD NQPLPVVTAL TMTRNGNAIT LAKRFYDEGV RSLSDFKNYL LRTRDQRHIM GVVHPASMHN LLLRYWLAAG GIDPDLDVDM RTIPPAQMVA DLQNKSIDGY CVGEPWNYRA AVENIGFTIA TDLEVWLGHP GKVLGVREDW AEKYPNTHIA LTKALLEACE YCSRPENVEE VRRIVAGRDY VSTDLDYIQL EDPNSLVCDI DHPLRDYAHH QFFAQSAINR PSRTEQIWIM SQLARWGDTP FPRNWVEVVE RVCRVRVFST AARELGLDIS YTRQPIELFD GTPFNADDPI AYLNSLHIKR DFSIAEVILD SPTRRVA
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