Gene Ava_1019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1019 
Symbol 
ID3678687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1229404 
End bp1229772 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content44% 
IMG OID637716355 
Producttransposase IS4 
Protein accessionYP_321538 
Protein GI75907242 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0443758 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTGAAAG TTGTTGTCAG TGAAGCCAAT GCGCCGGAAC GGGTACTTGC TGCCTACGCA 
TTAATGGAAC TTTTAGAGGA ACGTCCGGAA TTACTGGAAA AAGTTCAAGT CATGTGGGTT
GATTCCGGTT ACGACGGCGA TAAATTTGCT CTTTCAGTTT GGTTGATGAT CCAAGCACAT
GTTGAAGTCA TACGGCGTAC TGAGCAAGAA TTCCGGATTT TGCCCAAACG TTGGGTAGTC
GAAAGAACAT TTGGCTGGTT GAACCAATAT CATCGTCTCA GTAAGGATTA TGAGCATCTT
CCAGAGATGA GCGAAGCAGC TATATATGCT GTAATGACTA GGATTATGCT ACGTCGTCTT
GTATCCTAA
 
Protein sequence
MLKVVVSEAN APERVLAAYA LMELLEERPE LLEKVQVMWV DSGYDGDKFA LSVWLMIQAH 
VEVIRRTEQE FRILPKRWVV ERTFGWLNQY HRLSKDYEHL PEMSEAAIYA VMTRIMLRRL
VS