| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1016 |
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| Symbol | |
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| ID | 3679929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 1226765 |
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| End bp | 1228324 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637716352 |
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| Product | circadian clock protein KaiC |
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| Protein accession | YP_321535 |
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| Protein GI | 75907239 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction |
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| TIGRFAM ID | [TIGR02655] circadian clock protein KaiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.026109 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAGA AAGAGCAGCC GGAACAACAA AATACATCTG GTAATGGTGT AGAAAAAATT
CGCACAATGA TTGAAGGCTT TGACGATATT AGTCATGGCG GCTTACCTGT TGGTAGAACT
ACGTTAGTCA GTGGAACCTC TGGAACAGGC AAAACTTTAT TATCTCTACA GTTTCTCTTT
AACGGTATTA GCTTCTTTGA TGAACCAGGT GTATTTGTCA CCTTTGAAGA ATCGCCCAGC
GACATCATCA AAAATGCTCA TATTTTTGGC TGGAACTTAC AACGCCTAAT TAATGAGGGT
AAATTATTTA TTCTGGACGC ATCTCCAGAC CCAGAAGGCC AAGATATCGT TGGCAACTTT
GATCTTTCCG CATTAATTGA GCGCTTGCAA TATGCAATTC GTAAATACAA GGCCAAACGA
GTATCCATCG ACTCCATCAC CGCCGTATTC CAGCAATATG AAGCAGTGGG GGTTGTACGT
CGAGAGATTT TTCGCCTAGT AGCGCGTCTC AAACAACTCA ATGTCACTAC AATAATTACC
ACCGAACGCA GCGAAGAATA TGGGCCAGTA GCCTCCTTTG GTGTAGAGGA ATTTGTATCC
GATAACGTGG TCATAGCCCG TAACGTTTTA GAAGGAGAAC GTCGCCGCCG CACCATTGAA
ATATTGAAAT TGCGTGGTAC AACTCACATG AAAGGTGAGT ATCCTTTCAC AATTACCAAT
GATGGTGTGA ACATTTTCCC ATTAGGAGCA ATGCGCTTGA CTCAAAGGTC TTCTAATGTC
CGGGTTTCTT CTGGTGTCAA AACTCTAGAT GGAATGTGCG GTGGTGGGTT CTTTAAAGAC
TCAATCATTT TAGCCACAGG GGCTACCGGT ACGGGTAAAA CCCTGTTAGT GAGTAAATTC
TTACAAAATG GCTGCGTCAA CAACGAGCGA GCGATATTAT TCGCTTATGA AGAATCACGC
GCTCAACTAT CTCGGAATGC TTATTCTTGG GGTATTGATT TTGAAGAATT AGAAAGCCAA
GGTTTACTGA AGATTATTTG TACCTACCCA GAATCAACTG GGTTAGAAGA CCACCTGCAA
ATTATTAAGT CCGAAATTGC CTATTTTAAA CCAGCAAGAA TTGCTATTGA TTCCCTATCA
GCACTAGCTA GAGGTGTAAG TAATAATGCT TTCCGGCAGT TTGTTATTGG TGTCACAGGT
TATGCCAAAC AAGAAGAAAT TACGGGCTTC TTTACTAACA CAACTGACCA ATTTATGGGA
TCTCATTCCA TAACCGACTC TCACATCTCT ACAATTACCG ACACAATCTT AATGCTACAG
TACGTAGAGA TTCGTGGGGA AATGTCAAGG GCAATTAACG TATTTAAGAT GAGAGGTTCC
TGGCACGACA AAGGAATTAG AGAATATAAT ATCACGGCAG ATGGTCCAGA AATTCAAGAT
TCTTTCCGTA ACTACGAAAG AATTGTCAGT GGCTCTCCAA CCCGCGTTAG TATTGACGAG
AAAGCGGAAC TTTCTCGGAT AGTCCGACGT TTTGAAGACA AACAGGGTTC CGATTCCTAA
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| Protein sequence | MSEKEQPEQQ NTSGNGVEKI RTMIEGFDDI SHGGLPVGRT TLVSGTSGTG KTLLSLQFLF
NGISFFDEPG VFVTFEESPS DIIKNAHIFG WNLQRLINEG KLFILDASPD PEGQDIVGNF
DLSALIERLQ YAIRKYKAKR VSIDSITAVF QQYEAVGVVR REIFRLVARL KQLNVTTIIT
TERSEEYGPV ASFGVEEFVS DNVVIARNVL EGERRRRTIE ILKLRGTTHM KGEYPFTITN
DGVNIFPLGA MRLTQRSSNV RVSSGVKTLD GMCGGGFFKD SIILATGATG TGKTLLVSKF
LQNGCVNNER AILFAYEESR AQLSRNAYSW GIDFEELESQ GLLKIICTYP ESTGLEDHLQ
IIKSEIAYFK PARIAIDSLS ALARGVSNNA FRQFVIGVTG YAKQEEITGF FTNTTDQFMG
SHSITDSHIS TITDTILMLQ YVEIRGEMSR AINVFKMRGS WHDKGIREYN ITADGPEIQD
SFRNYERIVS GSPTRVSIDE KAELSRIVRR FEDKQGSDS
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