| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1008 |
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| Symbol | ruvB |
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| ID | 3679920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1217486 |
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| End bp | 1218586 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637716343 |
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| Product | Holliday junction DNA helicase RuvB |
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| Protein accession | YP_321527 |
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| Protein GI | 75907231 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
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| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000228051 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00140746 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCGATCA TCTCCTCAAA AAAACAGCCC CCAGAACCCA ACGGACAGCC AAACAAGCGC
CCGGAGTCAG CACCAGCCGC CCCTAAAGAG AAGGTTTTGC AACCTGAAGC TGCTATTGAT
GAGCAAGGTA AGCAAGAAGA AAGTATCAGA CCACAAAAAT TCGCCGACTA CATCGGACAG
AAAGACCTGA AAGACGTGCT GGACATTGCC ATCAAAGCAG CCAAGTCGCG GGGTGAAGTT
TTGGATCACT TGCTACTGTA TGGCCCGCCA GGATTGGGTA AAACAACAAT GGCAATGATA
TTAGCTTCGG AAATGGGAGT CAATTACAAA ATCACTAGTG CGCCCGCCTT AGAACGTCCC
AGAGATATTG TCGGGCTACT AGTGAACCTC AAACCCGGTG ATATTTTATT TATTGATGAA
ATCCATCGAC TTTCGCGGAT GACCGAAGAA ATTCTCTATC CGGCAATGGA AGATTACCGC
TTAGATATCA CCGTGGGTAA AGGTTCCAGC GCTCGGATTC GGAGTATACC TTTGTCTAAG
TTTACCTTAG TGGGGGCAAC AACCCGCGTA GGTGCCTTAA CTTCACCACT GCGCGATCGC
TTCGGCTTAA TTCAAAAACT GCGCTTTTAC GAAGTTGACG AACTCAGCCA AATAGTCCTG
CGGAGCGCTC AGTTACTCCA AACCCAAGTT ACCGACGACG GAGCCACAGA AATCGCCCGT
CGTTCACGGG GAACACCACG TATCGCCAAT CGCTTACTTA AACGTGTCCG CGATTATGCA
CAGGTAAAAT CCTGCACAGA AGTTAGCCAA AATATTGCTG CCGAAGCACT ACAGCTATTT
CAAGTAGACC CATGCGGACT CGATTGGACA GACCGTCGAA TGCTCAGTGT GATTATCGAG
CAATTTAACG GTGGCCCCGT AGGTTTAGAA ACAATTGCCG CCGCGACCGG AGAAGATACC
CAAACAATAG AAGAAGTATA CGAACCTTAC CTGATGCAAA TTGGCTATCT CAGTCGGACT
CCCCGTGGTC GCACAGCCAC CAAAGCCGCC TATAAACACA TGGGATTTAC GCCACCAAAC
GAGCAGCTAT CTTTACTTTA A
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| Protein sequence | MAIISSKKQP PEPNGQPNKR PESAPAAPKE KVLQPEAAID EQGKQEESIR PQKFADYIGQ
KDLKDVLDIA IKAAKSRGEV LDHLLLYGPP GLGKTTMAMI LASEMGVNYK ITSAPALERP
RDIVGLLVNL KPGDILFIDE IHRLSRMTEE ILYPAMEDYR LDITVGKGSS ARIRSIPLSK
FTLVGATTRV GALTSPLRDR FGLIQKLRFY EVDELSQIVL RSAQLLQTQV TDDGATEIAR
RSRGTPRIAN RLLKRVRDYA QVKSCTEVSQ NIAAEALQLF QVDPCGLDWT DRRMLSVIIE
QFNGGPVGLE TIAAATGEDT QTIEEVYEPY LMQIGYLSRT PRGRTATKAA YKHMGFTPPN
EQLSLL
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