Gene Ava_1004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1004 
Symbol 
ID3679916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1213708 
End bp1214163 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content37% 
IMG OID637716339 
Productresponse regulator receiver domain-containing protein 
Protein accessionYP_321523 
Protein GI75907227 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000076493 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTGGTA GCAACACCCA ACCTTTATTA GTAATTGAAG ATAGCGACGA AGATTTTGAG 
GCTTTGCAGC GAGTCATGCA ACGAGAAGTT GTCTTAAATC CTGTTTTTCG TTGCACTGAT
GGTGAAGATG CTTTAGATTT TCTCTACCAT ACAGGAGCTT ATCTCGACCC AGCAACGGCT
CCTTGTCCCT CGATTATTTT GCTTGATTTA AATTTACCGG GAACTGATGG GCGAGAAATA
TTAGCGCAAA TTAAACAGGA TCATAATCTC AAACATATTC CTGTGATTGT CCTCACAACT
TCTTGTAATC CTAAAGATAT TGAAATATGT TACCAATATT GCGCCGCTAG TTATATCCTT
AAGCCTATAG ATATTAACCG TTTAGTTAAA ACTATTCAAA GCTTTTTAAC TTATTGGTTA
GATATTGTGA TTCTTCCTGA TGCTGTTAGC AATTAG
 
Protein sequence
MIGSNTQPLL VIEDSDEDFE ALQRVMQREV VLNPVFRCTD GEDALDFLYH TGAYLDPATA 
PCPSIILLDL NLPGTDGREI LAQIKQDHNL KHIPVIVLTT SCNPKDIEIC YQYCAASYIL
KPIDINRLVK TIQSFLTYWL DIVILPDAVS N