| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0999 |
|---|
| Symbol | |
|---|
| ID | 3680028 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 1206025 |
|---|
| End bp | 1207197 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637716334 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_321518 |
|---|
| Protein GI | 75907222 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0123393 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGTAT CAAAATCGCA TATCCTATGG GTACAAGTTT GGGTATTGGC AGCACTACAG
GGAGCAATCA CCCTGGCTTG GATCATATAT AATGCCTACG TACCCAAACT TCTAGTTCAG
TTTGGTTTTC CCCCATCCTT GGCAGTGGGT TTGCTGGTGG TGGAAAATGC CTTGGCTGTG
ATTATGGAAC CACTCATGGG TGGGCTTTCG GATCAAGCAC AGCGTTGGGT GGGTAGTCGA
TTTTTGTTAA TCTCCGCAGG GGTGATTCTC TCAGCGACAC TATTAATTGC GATCCCCTGT
ATTGTTACTT TCGTTCCTCC TACCGTTGTC TGGCGATCGC TTTTACCAAT AGTATTAGTA
GCCTGGGCTT TGTCTATGAC AGTGTTTCGC AGTCCAGCGA TCGCTTTATT AGCCAAATAC
TCAATGCCTG CCGAGTTACC TTTAGCATTT AGTGTTGTCG TCTTGACAGG AGGCATAATT
GGTGCATTTC GACCAATTGC CAATAAGTTT ATCCTCAATT TAGGACCAAT TTTTGCTTTT
GCGATCGCCT CTTTCGTATT ACTGGCGGTA ACGGCTGCAT TGCGCTTAGT CAACCCTCCT
CATACACCCG TTACCAACCC AAGAGAAATT ACACAGTTAC CCAACAGAGA ATTAAGTTTA
ATTTTAGGTA CTGGTTTTGG TGTGGCCTGG GGTTCGCGGT TAGTCATGGA TATTTTGGGA
AAAATTCTCC CAGTCCAACT GCAAATCACC AATAATGATT GGTTGATGGT ATGGGTGGGA
CTAGCGATCG CAGTTGCCAG CTTACCTGCG GCATGGTTCA CTATGAAAGT AGGCGATCGT
CAAGCCATGC TGATTGGTAT TGGCCTAACT ACTTTGTCAC TACTAATTAT GGTTTGCTTC
AATATCCCAA TTCCTTTTTT ATTAACCCTA ATTGTGGGAT TTAGTGTCAT TATCAACGGT
ACAATTCCGT TTTGTTTACG ACTAGTGTCT CAACCTTGGG AAGGTTTGGG AATTGGGATG
TATTTTGGTG GGTTTGCTTT AGCAATGAGT TTATTTGGAG CAATTTTCCC CCAACCCCAA
CAAATTACAC CAGTTGTAGG TCTAATTGGG TTGATTTTAG CTTTTTTACT AGCTGGAGGA
TGTATTGCGG CTAGCGGCGA GACTAATCCT TAA
|
|---|
| Protein sequence | MNVSKSHILW VQVWVLAALQ GAITLAWIIY NAYVPKLLVQ FGFPPSLAVG LLVVENALAV
IMEPLMGGLS DQAQRWVGSR FLLISAGVIL SATLLIAIPC IVTFVPPTVV WRSLLPIVLV
AWALSMTVFR SPAIALLAKY SMPAELPLAF SVVVLTGGII GAFRPIANKF ILNLGPIFAF
AIASFVLLAV TAALRLVNPP HTPVTNPREI TQLPNRELSL ILGTGFGVAW GSRLVMDILG
KILPVQLQIT NNDWLMVWVG LAIAVASLPA AWFTMKVGDR QAMLIGIGLT TLSLLIMVCF
NIPIPFLLTL IVGFSVIING TIPFCLRLVS QPWEGLGIGM YFGGFALAMS LFGAIFPQPQ
QITPVVGLIG LILAFLLAGG CIAASGETNP
|
|---|
| |