| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0998 |
|---|
| Symbol | |
|---|
| ID | 3680027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 1205240 |
|---|
| End bp | 1205809 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637716333 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_321517 |
|---|
| Protein GI | 75907221 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4636] Uncharacterized protein conserved in cyanobacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0239622 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTTAT CAACTCCAGT ATTTGCCAAC AAAACACTAG AAGAGTTTCT GAAATTACCA
GAAACTAAAC CCGCCAGTGA ATATATTGAC GGTAAAATCT ACCAAAAACT GATGCCTCAA
GGAGAACATA GCACCTTACA AAGTAGTTTA GTAACAGCTA TTAATGAAAT TGCTAAACCA
CAAAAATTAG CTTACGCGTT TCCTGAGTTA CGCTGCACAT TTTCGGGAAA TTCTATAGTT
CCAGATATTG CTGTCTTTGA ATGGTCGCGT ATTCCTTTAC TTCCTAATGG CAGAATTGCC
AATAAATTTG AAATTTCCCC CGATTGGATT ATTGAAATTC TTTCTCCAGA ACAATCCCCT
AATCGGGTTA TCCGTAAAAT AATGTTTTCT ATGCAAAATG GTGCAAAGCT AGGTTGGTTT
CTCGACCCTA ATGATGAATC TATCATGGTT TTTCAACCCG ATATATTGCC AGAAATCAAA
GCAGGGAAAG AAATTTTACC TGTTATGAGT GTATTGGCGA ATTGGCAATT AACTGTAGAA
GATATTTTTA GTTGTTTGAA TTTTAGTTGA
|
|---|
| Protein sequence | MSLSTPVFAN KTLEEFLKLP ETKPASEYID GKIYQKLMPQ GEHSTLQSSL VTAINEIAKP
QKLAYAFPEL RCTFSGNSIV PDIAVFEWSR IPLLPNGRIA NKFEISPDWI IEILSPEQSP
NRVIRKIMFS MQNGAKLGWF LDPNDESIMV FQPDILPEIK AGKEILPVMS VLANWQLTVE
DIFSCLNFS
|
|---|
| |