| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0995 |
|---|
| Symbol | |
|---|
| ID | 3680024 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 1197572 |
|---|
| End bp | 1199356 |
|---|
| Gene Length | 1785 bp |
|---|
| Protein Length | 594 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637716330 |
|---|
| Product | transposase IS4 |
|---|
| Protein accession | YP_321514 |
|---|
| Protein GI | 75907218 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3666] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.000801512 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.101029 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCTC TCCAAACCTC TCCCCTCGTC GGATACTGTT GGCGAATTAT TGAAGGGTTA
AGCCCCTCAA GAGTTTGGAA CAGTGGAAAA AAGAGAATAA GTATATTGAG CGTAGCATCT
ACAAAGATTA TGACCCTGCA CCCGCGTGAT ATGTCGCAGA TTCCTGAAAC AACAGCGCAA
GTAGCCCGGA ATTCATTTCC CAAAGGGAAC ATATATATGA AGATGCGGGA TGAAATAGGA
GTGTTATATA AGGATGAGGA TTTTGTCAAA CTTTACCGCG CAGATTGTGG TCAAAGTGGA
ATATCAGCAG GACAACTGGC ATTAGTGACA GTAATGCAAT TTATCGAAGG TTTAACGGAT
AGACAAGCGG CGGATGCAGT GAGGGGTCAT ATTGATTGGA AATACGCACT ATCGTTGGAA
TTAAATGACC CAGGGTTTGA TTATTCAGTA CTTTCAGAAT TTCGTCAGCG ATTAATCAAA
GCAGGACGAG AGCGAGAGTT ACTCAACCAA ATGCTAGCTC GTTTCCAAGA ACTAGGTTGG
CTCAAAAATC GCGGCCGTGT CAGAACTGAT TCAACTCACG TATTAGCCGC AGTACGACAG
TTAAATCGTT TGGAATTAGT GGGAGAAACT TTACGTCATA CCTTAAATGA CTTGGCTTAT
TTTGCCCCTG ATTGGCTCAA ATCGAGAGTT GACGTTGATT GGTTTGAACG TTACTCCCTG
AGATTTGAGC AATACCGCTT GCCCAAATCA AAAGCCGAAC GTGAGAAATT GAGGCGAAAA
ATTGGTGAGG ATGGTCATCA TTTGCTATCC GCTTTGTATG CAGACTCAAC TTGTAATTGG
CTGTGGCAGA TTCCATCAGT GGAAACATTA CGTATAGTTT GGGTGCAACA ATACTATATT
CAATTGCAAC AAGTCTATTG GCGAGAACAA GATAACTTAC CACCAAATAG ACTACAGATT
GAATCTCCTT ACGATGTTGA TGCACGCAAT TCCAGCAAGC GAGAAATCAA CTGGACTGGT
TATAATCTGC ATCTGACAGA AATTTGTCAC CCCATACTGC CAAACTTAAT TATCAATGTG
GAAACGTCCG TGGCCACAAG TGCGGATGTT GAGATGACAC CAGTAATTCA TTCTCGTTTA
AACCAGAACA ATCTTTTGCC ACAAGAACAT GTTGTCGATA CTGGCTATGT CAATGCTCAA
AACTTAGTCG ATAGTCAATC CCATTTTCAT GTTGATTTAG TAGGAAAAGT TCCCCCCGGA
ACTAGTTGGC AAGCAACAGC ACAATCCGGC TTTGAGCAAA ATTGCTTCAC TATTCATTGG
GATTTGATGC GTGTTGATTG CCCAATGGGT AAACAAAGTA AGTCCTGGCG TACAACTGTC
GATAGCCATG ACAATCCAGT AGTCAAAATA CAATTTGACA AATCCGATTG TTCGCTTTGT
TCAAGTCGCT CAAAATGCAC TCGCTCCAAA AAACTACCGC GTCTTCTGAC CCTCAAACCA
CAGGAACTAC ATCTTGCATT ACATGATGCT CGCATTCGCC AAAAAACTGA ATCTTTTCAA
CAAATTTATC ACCAACGTGC TGGCGTTGAA GGCTTGATTT CCCAAGCTAC TGGTCGCTAC
CAATTACGCC GTTGTCGCTA CATTGGTCTT GCCAAAACTC TCTTGCAGCA TGTCATTACT
GCTGCTGCTA TCAACTTCAG TCGGATGTGG GATTGGTGGC AACATGTCCC ACGCAGTCAG
ACTCGCGTTT CTCACTTTGC TCGAATTGCT CCCACTGCCT CATAG
|
|---|
| Protein sequence | MTPLQTSPLV GYCWRIIEGL SPSRVWNSGK KRISILSVAS TKIMTLHPRD MSQIPETTAQ
VARNSFPKGN IYMKMRDEIG VLYKDEDFVK LYRADCGQSG ISAGQLALVT VMQFIEGLTD
RQAADAVRGH IDWKYALSLE LNDPGFDYSV LSEFRQRLIK AGRERELLNQ MLARFQELGW
LKNRGRVRTD STHVLAAVRQ LNRLELVGET LRHTLNDLAY FAPDWLKSRV DVDWFERYSL
RFEQYRLPKS KAEREKLRRK IGEDGHHLLS ALYADSTCNW LWQIPSVETL RIVWVQQYYI
QLQQVYWREQ DNLPPNRLQI ESPYDVDARN SSKREINWTG YNLHLTEICH PILPNLIINV
ETSVATSADV EMTPVIHSRL NQNNLLPQEH VVDTGYVNAQ NLVDSQSHFH VDLVGKVPPG
TSWQATAQSG FEQNCFTIHW DLMRVDCPMG KQSKSWRTTV DSHDNPVVKI QFDKSDCSLC
SSRSKCTRSK KLPRLLTLKP QELHLALHDA RIRQKTESFQ QIYHQRAGVE GLISQATGRY
QLRRCRYIGL AKTLLQHVIT AAAINFSRMW DWWQHVPRSQ TRVSHFARIA PTAS
|
|---|
| |