| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0994 |
|---|
| Symbol | |
|---|
| ID | 3680023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 1196083 |
|---|
| End bp | 1197255 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637716329 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_321513 |
|---|
| Protein GI | 75907217 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
[COG0607] Rhodanese-related sulfurtransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000000186232 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0867734 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAATC CCAACCTGGA AGATATCCAG TTAACTAAAG ACGACTACGA ACGCTACTCC
CGCCACCTGA TTTTGCCGGA GGTGGGAGTG GAAGGACAAA AACGGCTCAA AGCTGCCAGT
GTACTGTGTA TCGGTACAGG TGGACTGGGT TCACCACTAC TGTTATATTT AGCTGCCGCC
GGTATTGGAC GCATCGGTAT TGTCGATTTC GATGTGGTTG ATACTTCCAA CCTGCAACGC
CAAGTCATCC ACGGTACATC CTGGGTAGGT AAACCCAAAA TTGAATCTGC AAAAAACCGC
ATACACGAGA TTAACCCCTA TTGTCAGGTT GACCTCTACG AAACTCGTCT CAGTTCCGAG
AATGCCCTAG ATATCATCAG ACCTTACGAT ATTGTGGTGG ATGGTACAGA TAACTTTCCC
ACCAGATATC TAGTCAACGA TGCTTGCGTA TTATTGAACA AACCCAACGT CTACGGTTCC
ATTTTCCGCT TTGAAGGACA AGCCACAGTA TTTAACTACG AAGGCGGGCC AAACTACCGC
GACTTGTACC CAGAACCACC ACCACCAGGA CTAGTTCCCT CCTGTGCAGA AGGTGGGGTA
TTAGGGATTT TGCCAGGGAT TATCGGCGTA ATTCAAGCCA CGGAAACAGT GAAAATTATT
TTAGGTAACG GTAATACCCT CAGTGGTAGA TTATTGCTGT ACAACGCTTT AGATATGAAA
TTCCGCGAAT TGAAGTTACG TCCCAACCCC ATACGCCCAG TCATTGAAAA GCTGATAGAC
TACGAACAAT TCTGCGGTAT TCCTCAAGCC AAAGCAGCCG AGGCGCAAAA AATGCAAGAA
ATCCAAGAAA TGACAGTTAC CCAACTCAAG GAATTGCTGG ATAGTGGGGC GAAGGATTTT
GTCCTGCTAG ATGTGCGTAA CCCCAACGAA TACGAAATCG CCAAGATTCC TGGTTCTGTA
TTAATACCTT TACCAGACAT TGAAAATGGT AATGGTGTGG CTAAAGTCAA AGAAGCCCTC
AACGGACACC GCTTGATTGC TCATTGTAAG ATGGGTGGGC GATCGGCGAA AGCCTTAGCC
ATCCTCAAAG AATCGGGGAT TGTGGGGACA AACGTCAAAG GCGGAATCAC CGCTTGGAGT
CGGGAAGTAG ACCCATCAGT TCCTGAGTAT TAA
|
|---|
| Protein sequence | MLNPNLEDIQ LTKDDYERYS RHLILPEVGV EGQKRLKAAS VLCIGTGGLG SPLLLYLAAA
GIGRIGIVDF DVVDTSNLQR QVIHGTSWVG KPKIESAKNR IHEINPYCQV DLYETRLSSE
NALDIIRPYD IVVDGTDNFP TRYLVNDACV LLNKPNVYGS IFRFEGQATV FNYEGGPNYR
DLYPEPPPPG LVPSCAEGGV LGILPGIIGV IQATETVKII LGNGNTLSGR LLLYNALDMK
FRELKLRPNP IRPVIEKLID YEQFCGIPQA KAAEAQKMQE IQEMTVTQLK ELLDSGAKDF
VLLDVRNPNE YEIAKIPGSV LIPLPDIENG NGVAKVKEAL NGHRLIAHCK MGGRSAKALA
ILKESGIVGT NVKGGITAWS REVDPSVPEY
|
|---|
| |