| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0993 |
|---|
| Symbol | |
|---|
| ID | 3680022 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 1195522 |
|---|
| End bp | 1196019 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637716328 |
|---|
| Product | Mov34/MPN/PAD-1 |
|---|
| Protein accession | YP_321512 |
|---|
| Protein GI | 75907216 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1310] Predicted metal-dependent protease of the PAD1/JAB1 superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00000289855 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0727599 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAAC CAACTATCAA ACTCTTACCA CAACATCAGC AAACCATCCT CAGTCATGCT
GAAAGCGTCT ATCCGGAAGA GTGTTGTGGG TTGATTATGG GATACGTAGC CAATAAGGCG
AAAATTGTAG TGGAAGTCAT ACCTACCGCT AACGCTTGGG AGACAGAAGC AGATAACTTT
ACCCAAGAAA TAAACCAGAC AAATATCACT TCCCCAGCCT CCACCTTAAA AAGAAGATAT
GCGATCGCAC CTCAAGTTAT GTTACAGGTA CAAAGGCAAG CGCGGGATAA GTCACTCAAT
ATTATTGGTA TCTATCACTC TCACCCTGAT CATCATGCCG TACCTTCAGA ATGCGATCGC
CTCTATGCTT GGCCTGGATA CTCGTATATA ATAGTTTCCG TCCAAAAAGG TATAGCCAGT
GGCATCCTTA GTTGGAGCCT TGATGATCAT CATCAGTTTC AATCAGAAAT AATTGATAAC
ATAACTTTAA ATACTTAA
|
|---|
| Protein sequence | MNQPTIKLLP QHQQTILSHA ESVYPEECCG LIMGYVANKA KIVVEVIPTA NAWETEADNF
TQEINQTNIT SPASTLKRRY AIAPQVMLQV QRQARDKSLN IIGIYHSHPD HHAVPSECDR
LYAWPGYSYI IVSVQKGIAS GILSWSLDDH HQFQSEIIDN ITLNT
|
|---|
| |