Gene Ava_0992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0992 
Symbol 
ID3680021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1193091 
End bp1195304 
Gene Length2214 bp 
Protein Length737 aa 
Translation table11 
GC content47% 
IMG OID637716327 
ProductCd/Co/Hg/Pb/Zn-translocating P-type ATPase 
Protein accessionYP_321511 
Protein GI75907215 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01525] heavy metal translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0519582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.180719 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCG CCACCAGGTC TGGTATTAGT AAGCAAGTGG CTCTAAAATC AAGTTTCATC 
ACGGGAATTG ACTATAGTGT AGTCCATAAA ATTCCTGGCA GAATTAGATT TCGCGTTCCC
CTGGTAGCCC ATGACCTCTA TTATGCTCAA CGCCTGCAAG AATTACTAGA ATCTGACAGT
CACGTATTGG AAGTACGGGT TAATCCCTGG GCGGCTTCTG TTGCTATTAG ATATGAACAA
TCTGCTAGCA ACAATAGGCT AATGCAAGCT TATCTGGTAG GTTTACTGCA TCAGGCTAAA
TTTAGTCAAC AGTCAACAGT CAACAGTCAA CAAGTCACAA AATCAAATGA TGCTGGTGTA
AAATTGCCAG CTTTGGCAAC CATTTTAGCT TTATTGGGTT TGGGGTTTCC CATTCCCAGG
GCGATAATTG CAGCGACAGT GGGGCTGGCA GCTTTACCTA TAGCGAAACG TGCTTATGCT
AGCATTACCC AAAAACGAAA ATTAAATATA GATTGTTTAG ATTTTATCGC GATCGCCTTA
ACTTCTGCCC AAGGAAACCT TTTAACACCA GCTTTGGTGA TGACATTGCA TGAAATTGGC
GATATGATCC GCGATCGCAC CGCCAGAGTT ACGGAAAATC ATGCTGCCGA TTTACTGGCT
TCTTTGGGGC ATTACGCTTG GGTTGCACAA CCAGATGGGC AGAAAAAACG CCTCCTTGCC
ACAGAGGTGC AACCACAAGA TACAGTCATA GTTTATCCCG GTGAACAAAT CCCCGTAGAT
GGGCAAATAT TACGCGGTAA AGCTTTAATT GACCAACAAA AACTCACTGG TGAATCCATG
CCAGTTTTAC GTCAGGTGGG AGAAGCGGTT TATGCCTCCA CCTTACTCAG GGAAGGAGAA
ATTTACATCC AAGCTGAACG TGTAGGTACA GCTACCCGCG CCGGTGCAAG TATCGAGTTA
GTCCAACAAG CACCAGTTCA CGATACACGC ATGGGTAACT ATGCGGCGGA CATTGCCGAC
CAAGCCATAT TACCATCTCT AATTTTTGCC GGACTGGTAT TTGCAGCCAC CCGTAACCCC
GCCAGGGCTG CATCTATCCT CACCCTTGAT TTTGTCACAG GTATCCGCGT CTCCCTACCA
ACGACTTTCC TCGCCGCCTT ACACCACGCC ACAAGACACG GTGTTCTCAT CCGCAGTGGT
CGCGCTTTGG AAAAATTGGC ACAGGTAGAT ACATTAGTCT TTGATAAAAC AGGCACATTA
ACCAAAGGTG ATATCGAAGT TGTGGAAGTG GAAATCATCG CCGACAGAAT CACCACCCAC
AGACTTATAG CCCTAGCCGC CGCCGCCGAA CAACGCCTAA CCCACCCAGT AGCGGAAGCG
GTGGTACGTT ATGCCGAGAA ACAAGGTGTA GAAATTTTGC CCAGGCAAGA ATTTGAGTAC
GAAATTGGTT TGGGTGTAAG AGCCGAAATT GACGGTGAAC AAGTTATAGT AGGGAGCGAT
CGCTTTTTGC GTCAGTGTGG TATTCCCCTC GATTGTCTTT ATGAGCCACA TAGCTGCAAT
CATGCAGATT GTCCCAAGCA CCTCAATTGT CGCATTTCTG CCCATGATTC TTTACTGTAT
GTGGCAGTAA ATCAGGAGTT CCAAGGCGTA ATCTATTACA CCGACCCCCT GCGCCCAGAA
AGTCCAGCCG TGATTGAGAA ACTACAAACC GAATACGGCA TGGAAATACA TCTACTGACA
GGGGATAATC AGCAAAGGGC TATGGCTGTT GCGGCGGAAC TGCATCTTCC CCTATCTCAA
GTCCATGCAG AAGCATTCCC CGCACAAAAA GCCGAAATTA TCCAGAAATT ACATGATTCA
GGTAAAACTG TTGCCTTTAC CGGCGATGGT TTAAATGATT CCATTGCCCT AGCTTATGCA
GATGTCGCCA TTTCCTTTGG TAGTGGTTCC GAAGTAGCCA GAGAAACAGC CGATGTTGTC
CTGATGGATG ATACCTTGAC TAGTTTTGTG GAAGCAATAG CGATCGCTCG TCAAACCCAA
GCAATAATTA AACAAAATAT CAGTTTAGCC GTTGTTCCCA ATTTAGCCGC TTTAGGACTA
GCAACCACCG TAGGAATACA TCCCCTAGCG GCAACTGTAG TTCATAATGG TTCAGCCATT
GCAGCCGGGT TAAATGGTTT ACGTCCCCTC ATGCACAAAG ACCCACCAAG ATAG
 
Protein sequence
MTIATRSGIS KQVALKSSFI TGIDYSVVHK IPGRIRFRVP LVAHDLYYAQ RLQELLESDS 
HVLEVRVNPW AASVAIRYEQ SASNNRLMQA YLVGLLHQAK FSQQSTVNSQ QVTKSNDAGV
KLPALATILA LLGLGFPIPR AIIAATVGLA ALPIAKRAYA SITQKRKLNI DCLDFIAIAL
TSAQGNLLTP ALVMTLHEIG DMIRDRTARV TENHAADLLA SLGHYAWVAQ PDGQKKRLLA
TEVQPQDTVI VYPGEQIPVD GQILRGKALI DQQKLTGESM PVLRQVGEAV YASTLLREGE
IYIQAERVGT ATRAGASIEL VQQAPVHDTR MGNYAADIAD QAILPSLIFA GLVFAATRNP
ARAASILTLD FVTGIRVSLP TTFLAALHHA TRHGVLIRSG RALEKLAQVD TLVFDKTGTL
TKGDIEVVEV EIIADRITTH RLIALAAAAE QRLTHPVAEA VVRYAEKQGV EILPRQEFEY
EIGLGVRAEI DGEQVIVGSD RFLRQCGIPL DCLYEPHSCN HADCPKHLNC RISAHDSLLY
VAVNQEFQGV IYYTDPLRPE SPAVIEKLQT EYGMEIHLLT GDNQQRAMAV AAELHLPLSQ
VHAEAFPAQK AEIIQKLHDS GKTVAFTGDG LNDSIALAYA DVAISFGSGS EVARETADVV
LMDDTLTSFV EAIAIARQTQ AIIKQNISLA VVPNLAALGL ATTVGIHPLA ATVVHNGSAI
AAGLNGLRPL MHKDPPR