Gene Ava_0985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0985 
SymbolhisZ 
ID3680014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1185509 
End bp1186723 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content45% 
IMG OID637716320 
ProductATP phosphoribosyltransferase regulatory subunit 
Protein accessionYP_321504 
Protein GI75907208 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3705] ATP phosphoribosyltransferase involved in histidine biosynthesis 
TIGRFAM ID[TIGR00443] ATP phosphoribosyltransferase, regulatory subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0965259 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.656469 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGTATC AACCAGCAGC GGGAGCCAGG GATTTATTAC CTTTAGATGT GGCTCAAAAA 
CGCTGGATTG AAGATAAGTT ACAACAAGTG TTTCACCGTT GGGGTTATCA CAGAATCATA
ACCTCAACGC TGGAGCGCAT GGATACCTTG ATGGCGGGTG AAGCAATTCA ACGTCAGATG
GTGATTCAAC TACAAAATTC TGAAGATGAA GAGTTGGGAT TGCGTCCAGA GTTGACAGCT
TCTATTGCTC GTGCTGTTGT TACACGCATG ACAAATCTGC GTCATCCCCA GCGCCTTTAT
TACAATGCCA ACGTCTTTCG TCGCATCTGG GAAAATAGGC ACAATCGCCA GCAAGAGTTT
TATCAAGCTG GTGTGGAATT GTTGGGTGTC GGTGGACTTT TGGCAAATGC GGAAGTGTTG
CTGTTGGCGG GTAATTGTTT GACAGCACTG GGTTTACAAG ATTGGCATTT AATTTTAGGT
GAAGCGGGAA TCACCCGATC GCTTTTAGAT GCTTTTCCCA TCAATTTACG TGCTAAAGTT
CGTAGTGCGA TCGCTCACCT TGACCGCATT ACAATCGACA CTCTCCCCTT AACTGACGAA
CTGCGCGAAC GTGCCAGAAT CATGCTGGAT TTGCGAGGAA ACAGCACCGA TGTGTTGCAA
AAAGTCAGTA GCCTCAATTT AGATGCAGAA CAGCAAGAGG CGGTTAATAA CCTCCAGTCT
CTAGTAGAGT TATTAGAATC TGGGGGTAAA TTTCCGATAA TTCTCGACCT GAGTCTGATT
CAAACCATAG ACTACTACAC TGGTATTGTC TTTGAGATTG TCAACAATAC CGATTCACAA
GCAAGGGTTT TAGGACGTGG TGGACGCTAC GACCAGCTTT TAGGGTTGTA TCATCCCCAA
GGAGAAAATA TTCCGGGGAT TGGATTTGTC CTGAATATCG AAGACTTATA CCAAGTTCTT
TTAACTACAC AGCAATTACC ACAGGAAACC CCGGCTAGTG ATTGGTTAGT CGTGCCAGAA
AACCCAAAAG CCCATAGTGC GGCTTTTGCC CATGCTCAAA AACTACGTGA ATCTCCTGAT
TTAGTTAGAG TAGAATTAGA CTTGGGTGGC ACAGATATAC CAGCCATTCA ACAATATGCC
CGCGATCGCC GTATTGCTCA AATCGCTTGG ATCAAGGCCG ACGGATCACT AATAATTGAA
AAGGTGAGTC AATAG
 
Protein sequence
MVYQPAAGAR DLLPLDVAQK RWIEDKLQQV FHRWGYHRII TSTLERMDTL MAGEAIQRQM 
VIQLQNSEDE ELGLRPELTA SIARAVVTRM TNLRHPQRLY YNANVFRRIW ENRHNRQQEF
YQAGVELLGV GGLLANAEVL LLAGNCLTAL GLQDWHLILG EAGITRSLLD AFPINLRAKV
RSAIAHLDRI TIDTLPLTDE LRERARIMLD LRGNSTDVLQ KVSSLNLDAE QQEAVNNLQS
LVELLESGGK FPIILDLSLI QTIDYYTGIV FEIVNNTDSQ ARVLGRGGRY DQLLGLYHPQ
GENIPGIGFV LNIEDLYQVL LTTQQLPQET PASDWLVVPE NPKAHSAAFA HAQKLRESPD
LVRVELDLGG TDIPAIQQYA RDRRIAQIAW IKADGSLIIE KVSQ