Gene Ava_0967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0967 
Symbol 
ID3680230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1169987 
End bp1171222 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content44% 
IMG OID637716301 
ProductMltA 
Protein accessionYP_321486 
Protein GI75907190 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2821] Membrane-bound lytic murein transglycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.820227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAGAA AAACCCTTGC TTTGTTTTCC TTGAGTCTGG GAATTGCTTT GGTAAATCCG 
ATCGCAGTAG CCCAGGTGAT TGATGTCCCG TCACCACTCC CTAGCAATCC TGAACTACCT
TCGCCTGTAA CTCGGACTCC CCTGAAACTT GTAGAAATTG GTAACAATTG TGTTACCCAA
AATCCTTGTT TGGGTTTCGA TGAGCAAATT TTTGGTGTAG GTAGAACAAG CGACCGCAAA
GCGCTATTAG CGTCAATTGA CAATAGTCTG CGTTACTTAC AAACGAATAC CGCCAAACGA
ATTTATCAGA ATTATCCAGT TAGAGGAATC ACGCTGGATC GGGTACGGCG GAGTTTATTA
CGTTTCCGTC AACTAGTTGT CAATTCTAAA ACTCCAGCCC AACTGCAAGC TGCGGTGCGA
CGAGAGTTTG CTTTTTACCA GTCTGTAGGT AATGACGGCA AGGGTACTGT TAAGTTTACT
TCCTACTATC AACCAGTTTA TAGAGCTAGT CGTGTCAGAA CTTCTGTATA TAAATATCCT
GTATATCGCT TACCATCTAA CTTCAAGCAA TGGTCTAAAC CACACCCAAC AAGATTAGAA
CTGGAAGGTG AAGACGGTTT ACAAGGAGAT AATAGCCCAT TGCGTGGTTC AGAATTGCTC
TGGTTTAGCG ATCGCCTAGA TGCGTACTTT GTACAAATTC AAGGTTCTGC CCAAATTCAA
TTAACTAATG GACAACGAAC TGCGATCGGT TATGCAGGTG GAACCGATTA CCCTTGGACT
AGTATTGGGC GAGAACTGGC CAAAGATGGC AAACTTCCCT TGTCGGGGAT GACACTACCA
AAAATGATCA GTTTCTTCCG CCAACAACCA GAGGAGTTAA ATAACTACTT ACCACGTTGG
GAAAGATTTG TTTTCTTCCA AGAAACTGGT AGTAGACCAG CCACTGGTAG TATAAACGTA
CCAGTAACAG CAGAACGTTC TATTGCCACC GACAAATCTT TAATGCCTCC GGGCGCACTG
GCACTTGTTC ATACTTCTAT TCCCTTTCCC TCAGATGATG GTGGAAGAAT GGAGTATCGC
ACTGTCAGCC GCTATGTATT AGATCAAGAT ACTGGTAATG CCATCAAAGG CCCAGGGAGA
GTAGATTACT TCATGGGAAC AGGGAAACAA GCAGGCGATC GCGCAGGTGT GACAGGTGGT
CATGGTTCAC TCTATTATTT GTTGTTGAGG AAATAG
 
Protein sequence
MMRKTLALFS LSLGIALVNP IAVAQVIDVP SPLPSNPELP SPVTRTPLKL VEIGNNCVTQ 
NPCLGFDEQI FGVGRTSDRK ALLASIDNSL RYLQTNTAKR IYQNYPVRGI TLDRVRRSLL
RFRQLVVNSK TPAQLQAAVR REFAFYQSVG NDGKGTVKFT SYYQPVYRAS RVRTSVYKYP
VYRLPSNFKQ WSKPHPTRLE LEGEDGLQGD NSPLRGSELL WFSDRLDAYF VQIQGSAQIQ
LTNGQRTAIG YAGGTDYPWT SIGRELAKDG KLPLSGMTLP KMISFFRQQP EELNNYLPRW
ERFVFFQETG SRPATGSINV PVTAERSIAT DKSLMPPGAL ALVHTSIPFP SDDGGRMEYR
TVSRYVLDQD TGNAIKGPGR VDYFMGTGKQ AGDRAGVTGG HGSLYYLLLR K