Gene Ava_0964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0964 
Symbol 
ID3680227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1165246 
End bp1166850 
Gene Length1605 bp 
Protein Length534 aa 
Translation table11 
GC content46% 
IMG OID637716298 
Productbifunctional pantoate ligase/cytidylate kinase 
Protein accessionYP_321483 
Protein GI75907187 
COG category[F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0283] Cytidylate kinase
[COG0414] Panthothenate synthetase 
TIGRFAM ID[TIGR00017] cytidylate kinase
[TIGR00018] pantoate--beta-alanine ligase
[TIGR00125] cytidyltransferase-related domain 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.955795 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCTGT TGACAACAGT TGCGGCTTTA CGCTGCTATT TAAATAAACG TCGCTGGGAA 
AGTCAGCTGA CAGCATCAGA AGAACAGATA CTAGATAGTA TGACTAGCTG GTATCAGACT
GCAATTGGCT TGGTGCCAAC AATGGGGAGT TTACATCAAG GCCATTTGAG CCTGATTGAA
CGGGCGCGGC ACGAAAACTC TACTGTAATT GTGAGTATTT TTATCAATCC TCTGCAATTT
GGCCCAAATG AGGATTATGG AAGGTATCCC CGCACTTTAG AACAAGACCG ACAATTGTGC
GAGCAAGCGG GAGTTGATGC GATTTTTGCC CCTTCTCCGG AAGAATTAGG CATACCTCAG
AAAAATATAC AAGAATCTCA AGTTACACAA GTAATCCCTC CATCTGTTAT GATATCTGGC
TTGTGTGGTC ATTCTCGGTT AGGTCACTTT CAGGGTGTGG CGACGATTGT GACCAAGCTT
TTGAACTTGG TACAACCTGA CCGAGCTTAT TTCGGTCAAA AAGATGGTCA GCAGTTAGCT
GTGATTAAAC GGCTGGTGGC TGATTTAAAT TTGCCTGTAG AAATTGTTGC TTGTCCCACT
GTGCGGGAAG CGTCGGGTTT AGCCTGTAGC TCTCGCAACC AGTATTTAAC TGCTCCAGAA
AAACAGCAAG CAGCAGTATT GTATCGTGGC TTGCTGCAAG CTGAGGCTGC ATTTAAGGCA
GGTGTCCGCT ATAGCAGTAG GTTGCGAGAA GTGGTACGGC AGGAATTAGC CAAGGTTAGT
AGTGTTTTAG TGGAATATAT AGAATTGGTT GAACCGACTA CGTTAATGCC ATTAGATAAA
ATTCAGGAGG AAGGAATGCT GGCGATCGCT GCTCGTCTTG GCTCTACACG TTTGATTGAC
AATACCATTT TGCGCGATCG CCAACCTATC ATCGCTATTG ATGGGCCAGC CGGGGCGGGA
AAATCCACCG TGGCTCGTCA AGTAGCAACT AAACTCGGTT TAGTGTATCT AGATACAGGA
GCGATGTATC GTGCTGTGAC TTGGTTGGTG CTACAACAGG GTATTGCTAT TGACGATGAT
TGTGCGATCG CTGAATTAGC TAACAACTGT AAAATCGAGC TGACTCCTAG CCAAGATTTA
CAATCTCCGG TGCGTGTTTG GATTAATGAT ACTGATGTTA CCCAGGATAT TCGCACGATT
GAAGTGACTT CTCAAGTATC GGCGATCGCT GCTCAAGCTG CTGTACGTGA AGCCCTAGTA
AAGCAACAAC AACGCTGGGG TAAACGGGGT GGACTGGTAG CAGAGGGTAG AGATATTGGT
ACTCACGTAT TTCCTGACGC TGAAGTAAAA ATCTTTTTAA CCGCCTCTGT GGGTGAACGC
GCTCGTCGTC GCCAGCAAGA CTTTCAAAAA CAAGGTCAAC CAGAAGTAAG TCTAGAACAG
CTAGAAAAAG ACATCGCTGA ACGCGATTGG AAAGATAGCA CTCGCAAAGT TTCCCCTCTA
CAAAAAGCAG CAGATGCAGT TGAACTGCAA ACAGATGGAC TCAGCATATC GGATGTTGCT
AGCCAAATTG TTGATTACTA CCAACAACGC TTGTCTCAAT GGTAG
 
Protein sequence
MRLLTTVAAL RCYLNKRRWE SQLTASEEQI LDSMTSWYQT AIGLVPTMGS LHQGHLSLIE 
RARHENSTVI VSIFINPLQF GPNEDYGRYP RTLEQDRQLC EQAGVDAIFA PSPEELGIPQ
KNIQESQVTQ VIPPSVMISG LCGHSRLGHF QGVATIVTKL LNLVQPDRAY FGQKDGQQLA
VIKRLVADLN LPVEIVACPT VREASGLACS SRNQYLTAPE KQQAAVLYRG LLQAEAAFKA
GVRYSSRLRE VVRQELAKVS SVLVEYIELV EPTTLMPLDK IQEEGMLAIA ARLGSTRLID
NTILRDRQPI IAIDGPAGAG KSTVARQVAT KLGLVYLDTG AMYRAVTWLV LQQGIAIDDD
CAIAELANNC KIELTPSQDL QSPVRVWIND TDVTQDIRTI EVTSQVSAIA AQAAVREALV
KQQQRWGKRG GLVAEGRDIG THVFPDAEVK IFLTASVGER ARRRQQDFQK QGQPEVSLEQ
LEKDIAERDW KDSTRKVSPL QKAADAVELQ TDGLSISDVA SQIVDYYQQR LSQW