Gene Ava_0956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0956 
Symbol 
ID3681176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1155493 
End bp1156596 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content36% 
IMG OID637716290 
Producthypothetical protein 
Protein accessionYP_321475 
Protein GI75907179 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0478197 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTT CACTCAATCA GTTGCTTAAA TGGTTAATAA TAACCCTACT GTTTCCTCTA 
GTTTGTTTAA ATGGTTGGTT AGTTTTCGCA TTTTTCCAGT ATTTTAAACC GTTAGTAACA
ATATTCGTCC TGGCAATATT ACTGGCATTT GTTTTAAACT ACCCTGTTTC TTCTCTTCAG
AAACGGGGTA TTAAACGTGG TAATGCAGTA GGATTAGTTT TTGTTCTGAC TGTGATTATC
TTAATTGCTT CAGGTGTCAC TTTATTACCT ATAGCAATAG AGCAATTTCA TGAAATTGCC
AAAGTTTTAC CCCTATGGAT TGATTCTAGC CAAGAAAAAC TACAGAACTT AAATGATTGG
GCTGTTGGTC AACATTTTAA GTTGAATATA GGGCAAATAT TAACACGAAT TATTGATAAA
ATCCCTGATG AATTAGAGTC TGTTTCTAAT CAAACTTTTA AGATTATTGT AGAAACAGTA
GATAGTATCT CTGAAGCTAT AGTTACAGTA GTTATCACTT TTTACTTGCT AGTAGATGGG
CAAAGAATTT GGGAAGGAAT ATTTAAAAAG TTACCTATAT CTTTGGCTCA AAAATTAAAC
CAATCTATTC AGAAGAACTT TCAAAATTAT TTGATTGGAC AAGGGACTTT AGCTTTACTG
ATGGGAACTT CTCAAACTCT TTTGTTTTTA GCTTTTCAAG TGCAGTTTGG GTTACTGTTT
GGCTTAGGAG TTGGGTTTTT AAGCTTAATT CCTTTCGGTG ATGTTGTTAG CTTGATTGTG
ATTACGTTGA TTGTGGCTAC CCATGACTTT TGGTTAGCGT TGAAGATTTT AGCAGTAGCC
GTGGTCATTG ACCAAATTAT TGATCAGGCG ATCGCACCCC GTCTTTTAGG TAGTTTTACA
GGCTTACGAC CAATTTGGGT GTTAGTTTCT TTGCTTGTGG GAACATACAT CGGCGGTTTG
CTAGGATTGC TGATTGCTGT CCCTGTTGCT GGTTTAATCA AGGATGCAGT CGATGGTTTC
CCATCCTTAA CTACTGGTAT TGAGAATGTT TTATCGACAG AAACCACGAC AGAAGCCTTG
AGTCCAGAAT CAACGTCATC ATGA
 
Protein sequence
MNISLNQLLK WLIITLLFPL VCLNGWLVFA FFQYFKPLVT IFVLAILLAF VLNYPVSSLQ 
KRGIKRGNAV GLVFVLTVII LIASGVTLLP IAIEQFHEIA KVLPLWIDSS QEKLQNLNDW
AVGQHFKLNI GQILTRIIDK IPDELESVSN QTFKIIVETV DSISEAIVTV VITFYLLVDG
QRIWEGIFKK LPISLAQKLN QSIQKNFQNY LIGQGTLALL MGTSQTLLFL AFQVQFGLLF
GLGVGFLSLI PFGDVVSLIV ITLIVATHDF WLALKILAVA VVIDQIIDQA IAPRLLGSFT
GLRPIWVLVS LLVGTYIGGL LGLLIAVPVA GLIKDAVDGF PSLTTGIENV LSTETTTEAL
SPESTSS