Gene Ava_0954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0954 
Symbol 
ID3681174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1153234 
End bp1154226 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content44% 
IMG OID637716288 
Productzinc-containing alcohol dehydrogenase superfamily protein 
Protein accessionYP_321473 
Protein GI75907177 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.319163 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAC AGGGGAATCC TGAAGTACTG CAATTGCAGG AAGTACCCAA TCCTAGTCTT 
CCTGTGGGTA GTACAGAACT TTTAGTTCGT TTGGTAGCTG CTGGTATTAA CCCCATTGAT
ACTAAACTAC GCAAGCGTGG AACTTTTTAC CCTGAGAAAA TGCCTGCCAT TTTAGGATGT
GATGGTGCGG GTATTGTGGA AGCGGTGGGC GCTGGTGTCC AGAGTTTTGG TGCGGGGGAT
GCAGTGTATT TTTGCAATGG TGGTTTAGGG GGACATCAAG GCAATTACGC TGAATATACT
GTTGTTGATG AACGTTTTGT TGCCCGTAAG CCAGCTTCTC TGACCTTTGC TGAAGCCGCC
GCCGCACCGT TGGTACTAAT CACCGCTTGG GAGGCTTTAT ATGAACGGGG AAGATTAGAA
CCTGGAGAGA AAGTTTTAAT TCATGCGGGT GCGGGTGGTG TGGGTCATGT AGCCATTCAA
TTAGCAAAAC TGAAAGGTGC AACTGTCGCC ACTACGGTTG GTTCGGAAGA TAAGGCGCAT
TTTGTAAAAC AACTGGGTGC GGATCATGTG ATTTTCTATA AAAATACAGA TTTTGCCCAA
GCTGCTTTAA ATTGGACGAA CGGCGAAGGT GTAGATTTAG CTTTTGATAC TGTTGGCGGC
GACACTTTTC ACAAAACCTT TCCCGCCGTG CGTATCTATG GCGATATTGT GACGATTTTG
GAACCAGATG CAAATACAGT TTGGAAAGTT GCTAGAAACC GCAATTTACG TATTGGTTTG
GAATTAATGC TGACACCGAT GTTTTTAAAT TTAGTAGAAG CCCAGCAACA CCAGGCAGAA
ATTTTGACAG AATGTGCTGA TTGGATTGAT CAAGGTAAGT TAAAAATTCA CGTTAGTCAT
AAGTTTCCTT TGCAAGATGC AGCTAAAGCT CATCAGTTAC TTGAATCTGG CAGTATTGCG
GGTAAAATTG TTCTGCTGAT TAGCGATGAA TGA
 
Protein sequence
MTTQGNPEVL QLQEVPNPSL PVGSTELLVR LVAAGINPID TKLRKRGTFY PEKMPAILGC 
DGAGIVEAVG AGVQSFGAGD AVYFCNGGLG GHQGNYAEYT VVDERFVARK PASLTFAEAA
AAPLVLITAW EALYERGRLE PGEKVLIHAG AGGVGHVAIQ LAKLKGATVA TTVGSEDKAH
FVKQLGADHV IFYKNTDFAQ AALNWTNGEG VDLAFDTVGG DTFHKTFPAV RIYGDIVTIL
EPDANTVWKV ARNRNLRIGL ELMLTPMFLN LVEAQQHQAE ILTECADWID QGKLKIHVSH
KFPLQDAAKA HQLLESGSIA GKIVLLISDE