Gene Ava_0952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0952 
Symbol 
ID3681172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1149310 
End bp1150530 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content39% 
IMG OID637716286 
Producthypothetical protein 
Protein accessionYP_321471 
Protein GI75907175 
COG category[S] Function unknown 
COG ID[COG3372] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.447038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACCAA CGGAACTCCT AAGCCATCGC CTAAACGGCG AAGAAATAAT ACCAAAAAGA 
CTGAAGATTG ATCAGAAAAC AATTGATTTA ACCAATGAAT TAATCAGTTG TTTTCAAGCA
GCACAAGGTA AGACTCAAGG CTTTTTGGAA AATCAACTTT TGGATTTAGA AGGAGACGCT
ACAGATTATC GAGTTAAGCG GGGTTTAGCT TACATTATCA AAAGCAATTT CTGCACCTTT
GAAGTAGTGA GTCCTCTAGA ACCACCAATA TTGAGAGAAA GAGTGTTTTC CTTGGCTGCG
AAATCCGCAC CTAGTCGGGA ATCAACACAA CTGACATTGA GCAAAATTGC TGATGAATTA
ACTCAAGAAT TAGAACGGGA AATTTTACTA GAACAAGTCC GTGATGGACT TTATGCTGAT
TTGTCTGAAA ATAAGATTTT GACAAACTTT GATGTTCCCA CACCAGTAGA TATATTAAAT
CGCTATAACT TGTCCCAGGT GCAGGGAATA TTCTATAAAG CGAGTAAGTT AATTTTAAAT
GCTCATCGCA ATGTTCCAGG GGAATATAAA CTCTTATTCC GCTATCTCAA GCTATTTCAA
CTCATGGCTT ACATTGAAGG TGATGCTGAC CACGGGTTTA CAATTACCGT TGACGGGCCG
ACCAGCTTAT TTAATTCTAG TACACGCTAT GGGTTAGCGA TCGCCAAACT TATCCCCGCC
TTACTTCATG TCACCAAATG GAGTCTAGCA GCCACATTAC AAACCCGTGA TGTCTACACA
GATACATGGA AAACAGGCAG ATTTACCCTT AATTCCGAAT GCGGTTTAGT CTCTCATTAC
TCCAAAGGTA AACCCTACGA TAGTATGCTA GAAGCATCCT TTGCTGATAA ATGGGATGCC
TTAAAAACAG CATGGGCATT AGAAAGAGAA GTAGATTTAA TTCCCATTCC TGGGAGTGTG
ATGATTCCCG ACTTTCGCTT AGTTCATCCT GATGGTAGAG AATTTTTATT AGAAATAGTT
GGTTATTGGC GACCAGAATA TTTACAAAAA AAGTTTTCTC AAGTCCGGCG TTCTGGTTGC
GATAATTTAA TCTTGGCAAT CTCGGAAAGA TTGAATTTGG AAAAAGCCGG AGTTAAGTTA
GATAATGTGC CGGCAAAAAT CATTTGGTTT AAAGATAAAT TATTACCAAA ATCTGTTTTA
GCCGTGTTGG ATGAAACCTA G
 
Protein sequence
MLPTELLSHR LNGEEIIPKR LKIDQKTIDL TNELISCFQA AQGKTQGFLE NQLLDLEGDA 
TDYRVKRGLA YIIKSNFCTF EVVSPLEPPI LRERVFSLAA KSAPSRESTQ LTLSKIADEL
TQELEREILL EQVRDGLYAD LSENKILTNF DVPTPVDILN RYNLSQVQGI FYKASKLILN
AHRNVPGEYK LLFRYLKLFQ LMAYIEGDAD HGFTITVDGP TSLFNSSTRY GLAIAKLIPA
LLHVTKWSLA ATLQTRDVYT DTWKTGRFTL NSECGLVSHY SKGKPYDSML EASFADKWDA
LKTAWALERE VDLIPIPGSV MIPDFRLVHP DGREFLLEIV GYWRPEYLQK KFSQVRRSGC
DNLILAISER LNLEKAGVKL DNVPAKIIWF KDKLLPKSVL AVLDET