Gene Ava_0949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0949 
Symbol 
ID3681169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1144197 
End bp1144751 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content43% 
IMG OID637716283 
Product7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
Protein accessionYP_321468 
Protein GI75907172 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCTGTTG AGAACAAAAA AAATAGCCCA GAAATATTCA CAAAGCACGA TGCAGAGTTT 
AAACCAAAGA TACAGGCAAG TGCGATCGCT CTTGGTAGTA ATATCGGTGA TTCTTTAGCA
ATATTAGAAG CTGCTACAGC AGAGTTAGCG GCGATTGCAG GTATTCAACT AACAGCAAAA
TCCAGTTGGT ATATAACTAA AGCCGTGGGG CCGCCACAAC CAGACTACAT CAATGGTTGC
ATCAGCTTAC AAGTACAGAT GAGTCCGCTA GAATTGCTAG AAACATTACT AGCAATAGAA
CAGAAATTTG GGCGGGTGCG TCAAGAACGC TGGGGGCCGC GATCGCTAGA CTTGGATTTG
TTATTGTATG ATGACTTAAT TATTGATACA CCAACTCTCC AAATACCCCA TCCGCGAATG
CAAGAGCGAG CCTTTGTTTT AGTACCTCTA GCGGAGATTG CGCCCGACTG GTTAGAACCA
ATTTCCGGAT ATGTAATTAG AGAGCTGGTA AAAAAGGTAG ACTGTTCTGA TGTACATTTG
TTAAAGGGCA GTTAA
 
Protein sequence
MSVENKKNSP EIFTKHDAEF KPKIQASAIA LGSNIGDSLA ILEAATAELA AIAGIQLTAK 
SSWYITKAVG PPQPDYINGC ISLQVQMSPL ELLETLLAIE QKFGRVRQER WGPRSLDLDL
LLYDDLIIDT PTLQIPHPRM QERAFVLVPL AEIAPDWLEP ISGYVIRELV KKVDCSDVHL
LKGS