| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0938 |
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| Symbol | aksA |
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| ID | 3681312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 1133099 |
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| End bp | 1134235 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637716272 |
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| Product | trans-homoaconitate synthase |
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| Protein accession | YP_321457 |
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| Protein GI | 75907161 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR02660] homocitrate synthase NifV |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATGA ATAAAGTTCT AATTAATGAC ACTACACTAC GCGATGGAGA GCAAGCGGCG
GGTGTTGCTT TTAGCGTAGA GGAAAAAATC GCGATCGCCA AATTTCTGGA TGCGATCGGT
GTGGATGAAA TCGAAGTGGG AATACCCGCA ATGGGTAAAG CAGAACAAGA GGCGATCGCT
AATATTGTGA AGTTGAATTT GTCCGCCAAT CTACTTGGTT GGAACCGCGC CGTGATTTCT
GATATTCAGG CTTCCATCGC TTGTGGTTTA CAGCGAGTAC ATATCTCTAT TCCCGTTTCT
GCAATCCAAA TCGCCGCCAA ATTTCACGGA CAATGGCAAG TAGTTTTACA AAAACTCCAC
GACAGTATTA GCTTTGCTGT TGACCAAGGT TTATTTGTAT CCATCGGTGG TGAAGACTCA
TCAAGAGCCG AAGAAAGCTT CCTCCTTGAT GTAGTACTGG CTGCTCAAGA ATGGGGTGCC
TCACGGTTTC GCTTTTGTGA CACAGTAGGT ATTCTTGACC CATTTACTAC CCACGCCAAA
ATAAAACAAT TGGTGGCATC TTTGACAATA CCTGTAGAAA TGCACACCCA CAATGATTTT
GGTTTGGCAA CAGCTAACGC TCTCGCAGGT ATCAAAGCAG GCGCTTTATC GGTAAATACT
ACTGTGAATG GATTGGGTGA ACGAGCTGGG AATGCTGCTT TAGAAGAGGT GGTTATGGCT
CTCAAGCACT TGTATCACCA TGATTTAGGA ATTGATACGC GGCGTTTACT GGAAATATCT
CAACTCGTAG TATCAGCATC AGGTCATCCT GTACCACCTT GGAAAGCAAT TGTTGGTGAA
AATACTTTTG CTCACGAATC CGGGATTCAT GCTCATGGTG TACTGCAAAA TCCCCAGACC
TACGAACCAT TTGCACCAGA AGAAGTAGGG AGAGAGCGCC GTTTAGTTGT GGGTAAACAT
TCTGGTAGAC ATTTACTGTC CAGTATTTTG CAGCAACACG ACATTATTCT CAATCACGAA
GAAACCCAAT CTGTCTTAGA TGCAGTTAGA CAAGAATCAG TAGAAAAAAA ACGCAGCCTC
ACACCTCAAG AACTTTTACA TTTAGTGCAG ACAAAACAAC ATTTTCGTGC CTGTTGA
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| Protein sequence | MQMNKVLIND TTLRDGEQAA GVAFSVEEKI AIAKFLDAIG VDEIEVGIPA MGKAEQEAIA
NIVKLNLSAN LLGWNRAVIS DIQASIACGL QRVHISIPVS AIQIAAKFHG QWQVVLQKLH
DSISFAVDQG LFVSIGGEDS SRAEESFLLD VVLAAQEWGA SRFRFCDTVG ILDPFTTHAK
IKQLVASLTI PVEMHTHNDF GLATANALAG IKAGALSVNT TVNGLGERAG NAALEEVVMA
LKHLYHHDLG IDTRRLLEIS QLVVSASGHP VPPWKAIVGE NTFAHESGIH AHGVLQNPQT
YEPFAPEEVG RERRLVVGKH SGRHLLSSIL QQHDIILNHE ETQSVLDAVR QESVEKKRSL
TPQELLHLVQ TKQHFRAC
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