Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0924 |
Symbol | |
ID | 3681298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1118167 |
End bp | 1118883 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637716258 |
Product | orotidine 5'-phosphate decarboxylase |
Protein accession | YP_321443 |
Protein GI | 75907147 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAATA ACAAAATAAT TGTGGCTTTG GATGTGCCGG ATACGGAGAG TGCGATCGCT CTCATTGATA AGTTAGAGTC GGTGACTTTC TGGAAGGTTG GCTTGGAATT GTTTACTAGT TCCGGGCCGA GAATTCTAGA AGTGCTGAAA TCTAGACAAA AGCGTATCTT TCTCGATTTA AAATTTCACG ACATTCCTAA TACCGTGGCT GGGGCTTGCC GTGGTGCAGC CCGCTACGGG GTGGATTTGA TGACAATTCA TGCTACCTCT GGCAGAGATG CCCTCAAGGC TGCGAAAGAG GCGGTAGAGG AAGGGGCTGC ACAAGCTGGG GTGAAACCGT CTAAGTTAAT TGCTGTGACG GTGTTAACCA GTATTTCTGC TAGACAGTTG GCGTTAGATT TGAAAATTCC TGTAGAGTTG CCAGAATATG CTTTAGATAT GGCGTTGATG GCGCAAGAAG TAGGATTAGA TGGGGCTGTT TGTTCACCCC AGGAAGTGGC GCAGTTGCGG CAAATTTGCG GTGATGACTT TGTGCTGGTT TGTCCGGGAG TACGTCCAAC ATGGGCAGAA GCAAAAGACC AAAAGCGATC GCTCACCCCC TCCCAAGCCA TCCAAGCCGG GGCTGATTAT TTAGTAATTG GTCGTCCCAT TACTGCTGCT GCTGAACCTG AGTTAGCCTG GAAACGAATT GCTCAAGAGT TAACTACAGT GGCATGA
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Protein sequence | MTNNKIIVAL DVPDTESAIA LIDKLESVTF WKVGLELFTS SGPRILEVLK SRQKRIFLDL KFHDIPNTVA GACRGAARYG VDLMTIHATS GRDALKAAKE AVEEGAAQAG VKPSKLIAVT VLTSISARQL ALDLKIPVEL PEYALDMALM AQEVGLDGAV CSPQEVAQLR QICGDDFVLV CPGVRPTWAE AKDQKRSLTP SQAIQAGADY LVIGRPITAA AEPELAWKRI AQELTTVA
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