Gene Ava_0924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0924 
Symbol 
ID3681298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1118167 
End bp1118883 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content48% 
IMG OID637716258 
Productorotidine 5'-phosphate decarboxylase 
Protein accessionYP_321443 
Protein GI75907147 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0284] Orotidine-5'-phosphate decarboxylase 
TIGRFAM ID[TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAATA ACAAAATAAT TGTGGCTTTG GATGTGCCGG ATACGGAGAG TGCGATCGCT 
CTCATTGATA AGTTAGAGTC GGTGACTTTC TGGAAGGTTG GCTTGGAATT GTTTACTAGT
TCCGGGCCGA GAATTCTAGA AGTGCTGAAA TCTAGACAAA AGCGTATCTT TCTCGATTTA
AAATTTCACG ACATTCCTAA TACCGTGGCT GGGGCTTGCC GTGGTGCAGC CCGCTACGGG
GTGGATTTGA TGACAATTCA TGCTACCTCT GGCAGAGATG CCCTCAAGGC TGCGAAAGAG
GCGGTAGAGG AAGGGGCTGC ACAAGCTGGG GTGAAACCGT CTAAGTTAAT TGCTGTGACG
GTGTTAACCA GTATTTCTGC TAGACAGTTG GCGTTAGATT TGAAAATTCC TGTAGAGTTG
CCAGAATATG CTTTAGATAT GGCGTTGATG GCGCAAGAAG TAGGATTAGA TGGGGCTGTT
TGTTCACCCC AGGAAGTGGC GCAGTTGCGG CAAATTTGCG GTGATGACTT TGTGCTGGTT
TGTCCGGGAG TACGTCCAAC ATGGGCAGAA GCAAAAGACC AAAAGCGATC GCTCACCCCC
TCCCAAGCCA TCCAAGCCGG GGCTGATTAT TTAGTAATTG GTCGTCCCAT TACTGCTGCT
GCTGAACCTG AGTTAGCCTG GAAACGAATT GCTCAAGAGT TAACTACAGT GGCATGA
 
Protein sequence
MTNNKIIVAL DVPDTESAIA LIDKLESVTF WKVGLELFTS SGPRILEVLK SRQKRIFLDL 
KFHDIPNTVA GACRGAARYG VDLMTIHATS GRDALKAAKE AVEEGAAQAG VKPSKLIAVT
VLTSISARQL ALDLKIPVEL PEYALDMALM AQEVGLDGAV CSPQEVAQLR QICGDDFVLV
CPGVRPTWAE AKDQKRSLTP SQAIQAGADY LVIGRPITAA AEPELAWKRI AQELTTVA