Gene Ava_0917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0917 
Symbol 
ID3681350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1110331 
End bp1111224 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content42% 
IMG OID637716251 
Producthypothetical protein 
Protein accessionYP_321436 
Protein GI75907140 
COG category[S] Function unknown 
COG ID[COG5464] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAAG CCGCAGACAT CAGCACCAAA AAATTAATCA GCCTAGCACC CAACAACTGG 
GTAAGATGGG TAACACAGCT TTCTGATGTT GTCGCTGGAG AAATTCTCAG TTCTGACTTT
CAATGGATTA GTCGAGAGAG TGATGTTTTA ATTCGTGTCA CCAGTCCTGA ATATGGTGAA
TTTCTAGTCC TCAACGAATT ACAATTACGC TATCAACCCC GAATGCCAAG ACGGATGAGG
GCTTATGCCG CACTGGCAGA AGAAAAATAT AATTTACCCA CATACCCCGT TTTAATCAAT
ATTCTCAAAA CTAGTAACGA AGAAGTACCC ACAAGCTTTA CATCAAATCT TGCAGGATTA
CGGGCTATAC AAGATTATCG AGTCATTAAT CTTTGGGAAG TTGATGTGAA TATTGCTTTC
CAACAACCCT TACCTTCCCT ACTTCCCTTT GTACCCCTTC TTAAAGGTGG TGAGAATGAG
TTAATCATTC GAGAAGCATT GCAAACGCTT CGTGCGGACG AACAACTCAA TCAGTTAGAA
ACAGTCCTAG CTTTTTTTGC TACGTTTGTG TTAGAGAGTG CCTTAGTTCA AGAAATTATG
AGGTGGGATA TGGCTGTTTT ACGTGAGTCG CCTTGGTATC AAGAAATTTT GCGAGAAGGT
GAGATACGTG GTGAAGCACG CGGTGAAGCA CGCGGTGAAG CGCGCGGTGA GGCACGCGGT
AAACTGCTAG GATTGATGTC CGGTATTGAA ACTAATTTAG AAGCAAAGTT TGGCCAAGAC
GGTTTAGAAT TATTGCCACA AATTAGCCAA GTTGAAGATT TAGCCACCTT AAAGGAAATC
TTACGCAAAA TCGTTGCTGC CAAAACAATT GAAGAATTGC GGCAGATGCT GTAG
 
Protein sequence
MTKAADISTK KLISLAPNNW VRWVTQLSDV VAGEILSSDF QWISRESDVL IRVTSPEYGE 
FLVLNELQLR YQPRMPRRMR AYAALAEEKY NLPTYPVLIN ILKTSNEEVP TSFTSNLAGL
RAIQDYRVIN LWEVDVNIAF QQPLPSLLPF VPLLKGGENE LIIREALQTL RADEQLNQLE
TVLAFFATFV LESALVQEIM RWDMAVLRES PWYQEILREG EIRGEARGEA RGEARGEARG
KLLGLMSGIE TNLEAKFGQD GLELLPQISQ VEDLATLKEI LRKIVAAKTI EELRQML