Gene Ava_0914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0914 
Symbol 
ID3681347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1108512 
End bp1109261 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content45% 
IMG OID637716248 
Productundecaprenyl pyrophosphate synthase 
Protein accessionYP_321433 
Protein GI75907137 
COG category[I] Lipid transport and metabolism 
COG ID[COG0020] Undecaprenyl pyrophosphate synthase 
TIGRFAM ID[TIGR00055] undecaprenyl diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATAC AACAAACTGA ACTGCAAGAA TTGCCCCTGG ATTTAAAACG AGAACTACTG 
CCCAAACACG TTGCAGTAAT TATGGATGGC AATGGTCGAT GGGCTAAACG TCAAGGTCTA
CCCCGAATTA TGGGTCATAA ACGAGGAGTA GATGCCCTCA AGGATCTGCT ACGTTGCTGT
AGAGACTGGG GGATTCAGGC GCTGACGGCT TATGCTTTTT CCACAGAAAA TTGGAAAAGA
CCACAAGAAG AAGTAGAGTT TCTGATGACT CTGTTTCAGA GAGTTTTACG TCAAGAACTG
CGGGAAATGG TCGAAGAGAA TGTGCAGATT CAGTTTGTGG GTAATTTAGC AGCTTTGCCG
CGATCGCTGC AAGCAGAAAT TTCCCGTTCT ATGGAAGCAA CTAAAAATAA TCGCGGTATT
CGGTTTTCTG TCGCCACCAA TTATGGGGGA CGACAGGAGA TTTTACAAGC TTGCCGGGCG
ATCGCTCAAA AAGTCCAGCA AGGTCTGCTA CAACCAGATG AAATCGATGA AGAAGTATTT
GAACGCCACT TATACACAGC TGGTATTGCT GACCCAGACT TATTAATTCG TACCAGTGGC
GAAATGCGCC TCTCAAATTT CTTACTATGG CAAATGGCTT ATGGGGAAAT CTATATCACT
GATACTCTCT GGCCGGATTT TGACCGTACA GAGTTTCACC GCGCCTTATG TGCATATCAG
CAAAGAGAAA GACGGTTTGG GAAGGTTTAG
 
Protein sequence
MTIQQTELQE LPLDLKRELL PKHVAVIMDG NGRWAKRQGL PRIMGHKRGV DALKDLLRCC 
RDWGIQALTA YAFSTENWKR PQEEVEFLMT LFQRVLRQEL REMVEENVQI QFVGNLAALP
RSLQAEISRS MEATKNNRGI RFSVATNYGG RQEILQACRA IAQKVQQGLL QPDEIDEEVF
ERHLYTAGIA DPDLLIRTSG EMRLSNFLLW QMAYGEIYIT DTLWPDFDRT EFHRALCAYQ
QRERRFGKV