Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0894 |
Symbol | |
ID | 3681580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1088350 |
End bp | 1089444 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637716228 |
Product | TPR-related region |
Protein accession | YP_321413 |
Protein GI | 75907117 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000179778 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCAAACG GTGAAGGGAA CAACAGCATC AACAATAAGG TTCCTGTGCA AGTTGCCAAA TACCCCAAAC AAGTAAGGCG CAACACGATT ACTCACGAAT TTGACCAAGG TGAACCGAAA GAATCATTGG TTCCTCCAGA AAACGACAAT CACTCATCAG AAGCATCCAA GTTACTGCGG CAAGGAATTC AACAACAGCA GGCTGGAGAC TTAATAGCAG CCATCAAGTC TTTACAACAA TCCCTAGAGA TGTTTCAGCT AGCCAGGGAT GTCAAACAAC AAGAACAAGT CCTGTCGTTG CTGGCATTAA TCGCTTACAC CTCAGGAGAT TATAGAAATG TTATTTGTTA CTGTCAAAAA TGTTTATCCT TGACAGACAC CCCAGATTTA TCAGTAAGGA TGCAAATACT GTCTCATTTG GGTAATGCTT ATCGTCATCT GAACGACTAT AACAAAGCCA TTGAGTTTCT TGAAGCGTGT TTGCAACTAA CTCAAACGTT GCAAGACAAA CGGAGTCAAG TTGCAGCCTT AAATAATTTA GGATTAGTAT ATAAAGCTTC TGGTAATTTT AATCAAGCAA TTGCTTATCA AGAACAAAGC CTCATCATTG TTGAAGAACT CAAAGATAGC TGGGGCATAG AACAAGTACT GAAAAATCTA GGCAATACTT GGTATGCTTT GGATAATTAC CCAAAAGCGA TCGCCTACTA CGAAAAATGC GTCAAAATAG CACTCTCTTT AAATAATCCT CGTAGTGCTG CTCAAGTATT GAAAAACTTG GGTAATGCTT GCTATGCGAT CGGTGATTAT GCTAAAGCTA TTAAATACTA TGAAAAACGC TGGCAATTAG CTAGAGAACT CAAAGATAAG CGTAGTGAAG AACAGTCTCT TGGTAGTTTA GGTGTTGCCT GTGAAGCTCT AGGTGACCAT AGCAGAGCCA TTACATACTA TGAAGCACGC CTATTGTTAG CCAGAAGCAT CAAAGACCAA CGCATTGAAG AACAAGCTCT TGCCAGTCTG AAAATAGCTT GTTATGCCTT AGGGGATTAT GCCAAAGCCA TGCAATATGA ACGAGGAACA TCTACCAGTA CCTAA
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Protein sequence | MSNGEGNNSI NNKVPVQVAK YPKQVRRNTI THEFDQGEPK ESLVPPENDN HSSEASKLLR QGIQQQQAGD LIAAIKSLQQ SLEMFQLARD VKQQEQVLSL LALIAYTSGD YRNVICYCQK CLSLTDTPDL SVRMQILSHL GNAYRHLNDY NKAIEFLEAC LQLTQTLQDK RSQVAALNNL GLVYKASGNF NQAIAYQEQS LIIVEELKDS WGIEQVLKNL GNTWYALDNY PKAIAYYEKC VKIALSLNNP RSAAQVLKNL GNACYAIGDY AKAIKYYEKR WQLARELKDK RSEEQSLGSL GVACEALGDH SRAITYYEAR LLLARSIKDQ RIEEQALASL KIACYALGDY AKAMQYERGT STST
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