| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0890 |
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| Symbol | |
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| ID | 3681576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 1084547 |
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| End bp | 1085539 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637716224 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_321409 |
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| Protein GI | 75907113 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000201965 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAATGCAG AAATCTCCGC AGCGTGGGAT AAGGTTCAAA GCATGATCAA CGGTTTTATG
GCTTTGCTAC CCAATATTGT CTTAGCGTTG ATTGTCTTTC TAATATTTTT GTTTATTGCT
AGCAGAATTA AGGCACTAGT CAAGCGATTA ACTCGCAATC GTCATTCTGC ACGAAATCTG
GGATTAGTAT TAGGAAGGCT CGCGCAAGGT GTAACAATTT TGATTGGATT GTTTATTGCT
CTTTCCATTG TGATTCCCAC ATTTAGAGCA GGTGATTTAG TGCAACTTTT GGGAATTAGT
GGTGTTGCCA TTGGTTTTGC CTTCCGCGAT ATTCTGCAAA ACTTCCTCTC TGGGATTTTA
ATTCTGCTAA CTGAACCTTT TCAAATTGAT GACCAAATTG TATTTAAAGG CTTTGAGGGG
ACTGTAGAGA ATATCGAGAC ACGGGCAACG ACAATTAGAA CTTATGACGG TCGGCGAATT
GTTATTCCTA ACTCTGAGTT ATTTACTAAT TCGGTAACTG TCAACACTGC TTTTGATCAC
CGCCGACTAG AGTACGATGT TGGTATTGGC TACGGCGATG ATATTGACCT AGCCAAGCAG
TTGATGTTAG ATGCGCTGCA CAGCATAGAT GAAGTTTTAA AAGATCCTGC TCCTGATGTA
CTGGCGATGG AACTTGCCGA AAGTACCGTC AACATTCGTG TGCGTTGGTG GATCAAACCA
CCACGCAGGG CAGATGATTT ATCTTCACGG GACAAGGTAA TCTCTGCAAT TAAGAAAACG
CTTGTTGCTA ACGGCATTGA TTTACCCTTC CCAACACAAC AAATTTTATT TCACGACCAA
ACCGAAGAGA CAGATGGAAA CCGCTCCCGT CAGCGTGAAG GTTGGCCATC TGGGAAAAGC
GAAGTACCTA AGCCTCGCGG TGTCAGTGAT TCGCTCAGGT TACTTGCTCA AGCGCGCTCC
TCAAAAGATA GCAACGGCAA AGTAGATTCT TAA
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| Protein sequence | MNAEISAAWD KVQSMINGFM ALLPNIVLAL IVFLIFLFIA SRIKALVKRL TRNRHSARNL
GLVLGRLAQG VTILIGLFIA LSIVIPTFRA GDLVQLLGIS GVAIGFAFRD ILQNFLSGIL
ILLTEPFQID DQIVFKGFEG TVENIETRAT TIRTYDGRRI VIPNSELFTN SVTVNTAFDH
RRLEYDVGIG YGDDIDLAKQ LMLDALHSID EVLKDPAPDV LAMELAESTV NIRVRWWIKP
PRRADDLSSR DKVISAIKKT LVANGIDLPF PTQQILFHDQ TEETDGNRSR QREGWPSGKS
EVPKPRGVSD SLRLLAQARS SKDSNGKVDS
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