| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0884 |
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| Symbol | |
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| ID | 3681746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 1080249 |
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| End bp | 1081586 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637716218 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_321403 |
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| Protein GI | 75907107 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000328064 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGCTGG CTTATGAATG GTTGGGGCCA GTCATGTTTG CTGGTGCTTT AGTTCTATTA
TCTTCAGGCT ACCCAGTAGC TTTTGCTTTG GGTGGAGTAG CGATTTTATT TGGATTGTTG
GGAATTGGTT TAGGTGTCTT CGACCCTATA TTTCTGACAG CCATGCCACA GCGCATTTTT
GGCATTATGG CTAACTATAC CCTGTTAGCA ATCCCCTATT TTATTTTCAT GGGGGCAATG
TTAGAAAAAT CGGGCATTGC GGAAAGACTT TTAGAAACAA TGGGTATTTT GTTAGGACGC
TTGCGGGGTG GACTAGCTTT AGCTGTTGTC TTAGTAGGGG CATTATTAGC CGCAACCACT
GGTGTAGTAG CAGCCACGGT GGTGGCAATG GGTTTGATTT CTCTACCGAT TATGTTGCGC
TATGGCTACA ACAAAGAATT AGCTACTGGT GTAATTGCTG CATCGGGAAC CTTGGGACAA
ATTATCCCGC CGAGTGTGGT GTTGGTAGTA TTAGGCGATC AGTTGGGCGT ATCGGTAGGG
GATTTATTCA TTGGTTCCGT GATTCCTGGT TTGATGATGG CAAGTGCTTT TGCCCTTCAT
GTATTAATTG TGGCTTTCAT CAGACCGGAT GTAGCTCCCG CCTTACCTGC CGAAGTGAGA
GAAATCGGCG GTAAAGCATT GGGAAAAAGG GTTATACAGG TGATGATACC GCCTTTGATA
CTGATTTTAT TAGTATTGGG GAGTATCTTT TTTGGCTTTG CTACACCAAC AGAAGCAGGT
GCAGTAGGTT GTGCTGGGGC GATCGCTCTT GCAGCTGCTA ATGGTCAATT CACTTTAGAA
TCATTACGCC AAGTCTGCGA TACTACCTTA CGCATCACCA GTATGGTAGT TTTTATCCTC
ATTGGTTCCA CAGCATTTAG TTTAGTTTTC CGGGGATTGA ACGGCGATCA ATTCATGTTC
GATGTCCTAG CTAATCTCCC TGGTGGCAAA ATCGGCTTTT TGTTTGTCAG CATGACGGTA
GTATTTCTTT TGGGATTTTT CATCGACTTT TTTGAAATAG CCTTTATTGT CATACCTTTA
TTTGTTCCAG TCGCCCAAAA GTTAGGCATT GACTTAGTTT GGTACGGTGT GGTTTTAGGG
GCAAATTTGC AAACATCCTT TCTTACACCC CCCTTTGGCT TTGCCCTATT TTATTTACGA
GGTGTAGCAC CACCAGAAGT CACCACATCA GACATTTATC GCGGTGTCAT ACCCTTTATT
TTGCTACAAC TTTTAGTCCT GCTGTTAATC ATTATTTTCC CCGGAATTGT TAGTTTTTTA
CCATCTTTGG GAAGTTAA
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| Protein sequence | MTLAYEWLGP VMFAGALVLL SSGYPVAFAL GGVAILFGLL GIGLGVFDPI FLTAMPQRIF
GIMANYTLLA IPYFIFMGAM LEKSGIAERL LETMGILLGR LRGGLALAVV LVGALLAATT
GVVAATVVAM GLISLPIMLR YGYNKELATG VIAASGTLGQ IIPPSVVLVV LGDQLGVSVG
DLFIGSVIPG LMMASAFALH VLIVAFIRPD VAPALPAEVR EIGGKALGKR VIQVMIPPLI
LILLVLGSIF FGFATPTEAG AVGCAGAIAL AAANGQFTLE SLRQVCDTTL RITSMVVFIL
IGSTAFSLVF RGLNGDQFMF DVLANLPGGK IGFLFVSMTV VFLLGFFIDF FEIAFIVIPL
FVPVAQKLGI DLVWYGVVLG ANLQTSFLTP PFGFALFYLR GVAPPEVTTS DIYRGVIPFI
LLQLLVLLLI IIFPGIVSFL PSLGS
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