Gene Ava_0881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0881 
Symbol 
ID3681743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1077838 
End bp1078335 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content33% 
IMG OID637716215 
Productsmall GTP-binding protein domain-containing protein 
Protein accessionYP_321400 
Protein GI75907104 
COG category[R] General function prediction only 
COG ID[COG1100] GTPase SAR1 and related small G proteins 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.334755 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000103971 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTCAAA GAAAGATTTG TATGGTGGGT GCATTTGCTA CTGGTAAAAC TAGTTTAGTA 
GCTAGATTTG TTTATAGTAT TTTTTCGGAA AAATATCAAA CTACTGTTGG AGTCAAAATT
GATAAAAAAA TTGTTAATCT CCCGGAAAAT CCCGTTAATT TAATCATTTG GGATATTTAC
GGGGAAGATG AATTACAGAA ATTACAAATG TCATATATGC GGGGTTGTTC TGGCTATTTA
TTAGTAGTAG ATGGAACTCG CAAAAATACA TTAGAAACAG CTTATCGTTT GCAGAATAGT
TTAGAAGCTA ACTTTGGTCG AATTCCTTTT GTTTTAGTCA TGAATAAATG GGATATAACT
GACGAATGGG AGGTAGATCC GGCTGAAATT AATTCTCTAA TAAACAAAGG GTGGAATGTA
GTAGAAACCA GTGCTAAAAC TGGAATAGGA GTAGAGGAGG TTTTCCAAAT TTTGGCTCAA
AAAATTATGG AGACATAA
 
Protein sequence
MIQRKICMVG AFATGKTSLV ARFVYSIFSE KYQTTVGVKI DKKIVNLPEN PVNLIIWDIY 
GEDELQKLQM SYMRGCSGYL LVVDGTRKNT LETAYRLQNS LEANFGRIPF VLVMNKWDIT
DEWEVDPAEI NSLINKGWNV VETSAKTGIG VEEVFQILAQ KIMET