Gene Ava_0860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0860 
Symbol 
ID3681761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1052678 
End bp1053088 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content39% 
IMG OID637716194 
ProductDoxX 
Protein accessionYP_321379 
Protein GI75907083 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.2035 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.169459 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAAA CATACCTTCC TTTGATTGCT CGTTCTTTTC TGGCTGTGAT TTTTATTTAC 
ACTGGTGTGA ACAAAGTCTT TAACTTTGCC CAGACTAGTG AATTTATGGC TAAAGCCGGA
CTACCTATCG TAGGGGTACT ACTAGTTTTT ACTATTGCAT TTCAGATATT AGGCGGGTTG
TCTATTATTC TTGGTTATAA GGCAGAAATT GGTGCAATTT TACTCATCAT TTTCCTCATT
CCTGCTACCA TCGTGTTTCA TAATCCCTTC GCTGATCCTG GTCAATTCAA TAATTTCTTC
AAGAATTTGT CCATTATTGG TGGACTATTA CTCATCCTCG CCTATGGCTC TGGCACTCTT
AGTTTAGAAG CAAGCGATCG CTCTTCTTAT GCCTCACAGC CAGAGGAATA A
 
Protein sequence
MLKTYLPLIA RSFLAVIFIY TGVNKVFNFA QTSEFMAKAG LPIVGVLLVF TIAFQILGGL 
SIILGYKAEI GAILLIIFLI PATIVFHNPF ADPGQFNNFF KNLSIIGGLL LILAYGSGTL
SLEASDRSSY ASQPEE