Gene Ava_0855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0855 
Symbol 
ID3681756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1044513 
End bp1045808 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content47% 
IMG OID637716189 
Producthistidinol dehydrogenase 
Protein accessionYP_321374 
Protein GI75907078 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0141] Histidinol dehydrogenase 
TIGRFAM ID[TIGR00069] histidinol dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0621069 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAGTCT TGAAAACAAC CGACCAAGAA TTTTCTACCA GATTTCAAAG CTTGGTGAGC 
GATCGCCGAG AAGCAACGGT TGATGTTAGT GGTACAGTAC GCGATATACT CGCTCATGTG
AAAGCGCATG GTGATGCCGC AGTTCAGGAA TATACCAGTC GTTTTGATCA CTATAGTCCC
CATTCTCATC ATTTGAGTGC GGCTTTCATT GCCGAACAAG CAGCGAAATG TTCAGCTGAG
GTGAAAGCAG CCATAGAACT AGCGGCTGAA CGTATTAGTT CTTTTCATCA AAAACAATTA
CCCCAGGATA TCGGTTACAC CGACACCGTA GGCGTAAAAC TAGGCTTAAA TTGGGTAGCT
TTATCGCAAG TAGGAATTTA TGTCCCTGGA GGACGCGCCA GTTATCCCAG TTCGGTTTTG
ATGAATGCCC TGCCCGCCAA AATTGCAGGT GTAGAACGCA TAGTTATGAC TGTTCCTATG
CCTCATGGGG AAATCAATCC CGCCGTCCTG GCTGCTGCCC AAGTTGCCGG CGTGACAGAA
ATATATAGTA TAGGTGGGGC GCAAGCAGTC GGGGCGTTAG CCTACGGTAC AGAAACTATC
ACCCCAGTGG ATAAAATTGT GGGGCCTGGT AATGCCTACG TTGCTGAAGC CAAACGCCAA
GTATTTGGGA CTGTGGGGAT TGACAGCATT GCCGGGCCTT CAGAAATTTT AGTTGTCGCC
GATCGCCAAA ACAATCCAGA ATGGATCGCC TGGGATTTAT TATCTCAAGC TGAACATGAT
CCCAGCGCTC AATCAATTTT AATTACTGAC TCTGAATCCT TTGCCCAGCA AGTGATTGGG
GCAGTTGAGC AAATTTTGAC CACTTTACCC ACCACCAAAG TAGCCAGTAG CAGTTGGCAA
AATCACGGGG CAGTAATTAT TGTTAGGGAT TTAGCCGAAA GTATCCCTTT GCTCAATCAA
CTAGCTCCAG AACACGTAGA ACTGTGTGTA GATAATCCCC AATTGCTAGC TAGTCAAATT
AAGTGTGCTG GTAGTTTATT TTTAGGTCGT TATACCCCAG AGGCGATCGG CGATTATTTA
GGTGGCCCCA ATCACGTATT ACCAACTTCC CGTTCTGCCC GCTTTGCTTC CGGCTTAAGT
GTCTACGATT TCCTCAAGCG AATCACCTAT TTAGAATGCA ATCAAGCAGC ATTGCAGGCA
ATAGGCCAGT CCGCCGTCAC TCTTGCAGAA ACCGAGGGTT TACCAGCCCA CGCAGGTAGT
GTGGCTGTGC GTTTGCAAGG GTTGAACGAT ATGTAG
 
Protein sequence
MLVLKTTDQE FSTRFQSLVS DRREATVDVS GTVRDILAHV KAHGDAAVQE YTSRFDHYSP 
HSHHLSAAFI AEQAAKCSAE VKAAIELAAE RISSFHQKQL PQDIGYTDTV GVKLGLNWVA
LSQVGIYVPG GRASYPSSVL MNALPAKIAG VERIVMTVPM PHGEINPAVL AAAQVAGVTE
IYSIGGAQAV GALAYGTETI TPVDKIVGPG NAYVAEAKRQ VFGTVGIDSI AGPSEILVVA
DRQNNPEWIA WDLLSQAEHD PSAQSILITD SESFAQQVIG AVEQILTTLP TTKVASSSWQ
NHGAVIIVRD LAESIPLLNQ LAPEHVELCV DNPQLLASQI KCAGSLFLGR YTPEAIGDYL
GGPNHVLPTS RSARFASGLS VYDFLKRITY LECNQAALQA IGQSAVTLAE TEGLPAHAGS
VAVRLQGLND M